RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 DCHS1Q96JQ0 3298 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 A0A0A0MRY4 1105 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 NEDD8-MDP1E9PL57 170 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 SART1O43290 800 aaKnown RBP23.51■■□□□ 1.35
TRAF4-207ENST00000461195 TULP3O75386 442 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 CHKAP35790 457 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 SEC13P55735 322 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 MESP2Q0VG99 397 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 RAPGEF1Q13905 1077 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 TRIP4Q15650 581 aaPredicted RBP23.51■■□□□ 1.35
TRAF4-207ENST00000461195 MSANTD2Q6P1R3 559 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 SCUBE3Q8IX30 993 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 FAM71AQ8IYT1 594 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 PHTF2Q8N3S3 785 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 ANKRD20A12PQ8NF67 263 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 USP33Q8TEY7 942 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 XPO6Q96QU8 1125 aaKnown RBP23.51■■□□□ 1.35
TRAF4-207ENST00000461195 CYTH4Q9UIA0 394 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 AGO1Q9UL18 857 aaKnown RBP23.51■■□□□ 1.35
TRAF4-207ENST00000461195 PCDHGC3Q9UN70 934 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 FHOD1Q9Y613 1164 aa23.51■■□□□ 1.35
TRAF4-207ENST00000461195 CACNG3O60359 315 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 PNMA6AP0CW24 399 aaPredicted RBP23.5■■□□□ 1.35
TRAF4-207ENST00000461195 TYRP14679 529 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 CLCN1P35523 988 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 TNFRSF4P43489 277 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 FNTBP49356 437 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 BPIFB4P59827 614 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 DMWDQ09019 674 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 DRAP1Q14919 205 aaPredicted RBP23.5■■□□□ 1.35
TRAF4-207ENST00000461195 C2orf27AQ580R0 203 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 FKBP15Q5T1M5 1219 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 CAVIN1Q6NZI2 390 aaKnown RBP23.5■■□□□ 1.35
TRAF4-207ENST00000461195 SYT13Q7L8C5 426 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 LONP2Q86WA8 852 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 DENND1CQ8IV53 801 aa23.5■■□□□ 1.35
TRAF4-207ENST00000461195 UCHL3P15374 230 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 ID4P47928 161 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 HARS2P49590 506 aaKnown RBP23.49■■□□□ 1.35
TRAF4-207ENST00000461195 MRPS21P82921 87 aaKnown RBP23.49■■□□□ 1.35
TRAF4-207ENST00000461195 PDCLQ13371 301 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 HEATR6Q6AI08 1181 aaKnown RBP23.49■■□□□ 1.35
TRAF4-207ENST00000461195 NUDT18Q6ZVK8 323 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 TMEM110Q86TL2 294 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 SLC47A2Q86VL8 602 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 SFTPA1Q8IWL2 248 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 NAA15Q9BXJ9 866 aaKnown RBP23.49■■□□□ 1.35
TRAF4-207ENST00000461195 NAT10Q9H0A0 1025 aaKnown RBP23.49■■□□□ 1.35
TRAF4-207ENST00000461195 LHX5Q9H2C1 402 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 PLCB1Q9NQ66 1216 aa23.49■■□□□ 1.35
TRAF4-207ENST00000461195 DNAJC17Q9NVM6 304 aaKnown RBP23.49■■□□□ 1.35
TRAF4-207ENST00000461195 TBC1D3BA6NDS4 549 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 E5RJQ4 531 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 KRT9P35527 623 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 DMC1Q14565 340 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 GRAMD4Q6IC98 578 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 PASD1Q8IV76 773 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 CAMKK1Q8N5S9 505 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 TERB1Q8NA31 727 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 SUMF1Q8NBK3 374 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 FAM149B1Q96BN6 582 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 TRIM62Q9BVG3 475 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 EPC1Q9H2F5 836 aa23.48■■□□□ 1.35
TRAF4-207ENST00000461195 POLR3BQ9NW08 1133 aaPredicted RBP23.48■■□□□ 1.35
TRAF4-207ENST00000461195 LIMA1Q9UHB6 759 aaKnown RBP23.48■■□□□ 1.35
TRAF4-207ENST00000461195 PAPSS1O43252 624 aaPredicted RBP23.47■■□□□ 1.35
TRAF4-207ENST00000461195 MSI1O43347 362 aaKnown RBP23.47■■□□□ 1.35
TRAF4-207ENST00000461195 NCAM1P13591 858 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 CDK11BP21127 795 aaKnown RBP23.47■■□□□ 1.35
TRAF4-207ENST00000461195 HOXC13P31276 330 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 CNR2P34972 360 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 COPB1P53618 953 aaKnown RBP23.47■■□□□ 1.35
TRAF4-207ENST00000461195 NCAPHQ15003 741 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 ANO6Q4KMQ2 910 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 WDR5BQ86VZ2 330 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 CPXM2Q8N436 756 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 WDTC1Q8N5D0 677 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 BHMTQ93088 406 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 NOX5Q96PH1 765 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 STK33Q9BYT3 514 aa23.47■■□□□ 1.35
TRAF4-207ENST00000461195 CCDC163A0A0D9SF12 145 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 ANTXRLA6NF34 631 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 FRYLO94915 3013 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 PENKP01210 267 aaPredicted RBP23.46■■□□□ 1.35
TRAF4-207ENST00000461195 CYBBP04839 570 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 FYNP06241 537 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 ZNF18P17022 549 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 TIE1P35590 1138 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 KIR2DL1P43626 348 aaPredicted RBP23.46■■□□□ 1.35
TRAF4-207ENST00000461195 HSF5Q4G112 596 aaPredicted RBP23.46■■□□□ 1.35
TRAF4-207ENST00000461195 BEND5Q7L4P6 421 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 FAM217AQ8IXS0 508 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 AOPEPQ8N6M6 819 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 PPP1R13BQ96KQ4 1090 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 HHIPQ96QV1 700 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 GANQ9H2C0 597 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 PLK2Q9NYY3 685 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 MMP17Q9ULZ9 603 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 CEP83Q9Y592 693 aa23.46■■□□□ 1.35
TRAF4-207ENST00000461195 DMXL1Q9Y485 3027 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms