RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 HPS3Q969F9 1004 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 ELMO3Q96BJ8 720 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 SMARCD1Q96GM5 515 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 PIWIL1Q96J94 861 aaKnown RBP12.51□□□□□ -0.41
HCFC1-204ENST00000461098 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 NACA2Q9H009 215 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 SDCBP2Q9H190 292 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 C6orf106Q9H6K1 298 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-204ENST00000461098 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 PANK4Q9NVE7 773 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-204ENST00000461098 CLEC4EQ9ULY5 219 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 ANKRD6Q9Y2G4 727 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
HCFC1-204ENST00000461098 HHLA1C9JL84 531 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 NPC1O15118 1278 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 MDM4O15151 490 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 TGFB1I1O43294 461 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 AP1G2O75843 785 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 HLA-EP13747 358 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 TNNI1P19237 187 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 PRKCHP24723 683 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 ACSL1P33121 698 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 ATP5C1P36542 298 aaKnown RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 AFF3P51826 1226 aaKnown RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 CYP24A1Q07973 514 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 ZNF234Q14588 700 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 STARD3Q14849 445 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 PSMD6Q15008 389 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 SUZ12Q15022 739 aaKnown RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 SNRNP35Q16560 246 aaKnown RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 TMEM215Q68D42 235 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 LAYNQ6UX15 382 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 TMPRSS12Q86WS5 348 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 LSM14AQ8ND56 463 aaKnown RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 PRCCQ92733 491 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 CLIC6Q96NY7 704 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 ORAI3Q9BRQ5 295 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 PCED1AQ9H1Q7 454 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 KIAA1586Q9HCI6 787 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.5□□□□□ -0.412e-11■■■■■ 181.2
HCFC1-204ENST00000461098 TLR8Q9NR97 1041 aaKnown RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 KRT82Q9NSB4 513 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 NXF1Q9UBU9 619 aaKnown RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 NUDT5Q9UKK9 219 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 CLIC4Q9Y696 253 aa12.5□□□□□ -0.41
HCFC1-204ENST00000461098 COL5A1P20908 1838 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-204ENST00000461098 H0Y8X5 98 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 CYP26A1O43174 497 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
HCFC1-204ENST00000461098 STC2O76061 302 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 CCDC130P13994 396 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 GRK6P43250 576 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 KLHDC10Q6PID8 442 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 EPM2AIP1Q7L775 607 aaPredicted RBP12.49□□□□□ -0.41
HCFC1-204ENST00000461098 FAM124AQ86V42 546 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 CACUL1Q86Y37 369 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 SORCS1Q8WY21 1168 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 IGSF8Q969P0 613 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 CCDC127Q96BQ5 260 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 MED10Q9BTT4 135 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 FBXO44Q9H4M3 255 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 TM9SF3Q9HD45 589 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.49□□□□□ -0.41
HCFC1-204ENST00000461098 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 HMGXB4Q9UGU5 601 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 LSM7Q9UK45 103 aaKnown RBP12.49□□□□□ -0.41
HCFC1-204ENST00000461098 SCML2Q9UQR0 700 aa12.49□□□□□ -0.41
HCFC1-204ENST00000461098 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
HCFC1-204ENST00000461098 NAV2Q8IVL1 2488 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 ATP8B3O60423 1300 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 TSPAN3O60637 253 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
HCFC1-204ENST00000461098 ATICP31939 592 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 CTSKP43235 329 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 PLA2G4AP47712 749 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 GRIA4P48058 902 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 ORC1Q13415 861 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 CCDC157Q569K6 752 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 LARP1BQ659C4 914 aaKnown RBP12.48□□□□□ -0.41
HCFC1-204ENST00000461098 BRAPQ7Z569 592 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 ZNF605Q86T29 641 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 ACOT1Q86TX2 421 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 ZNF507Q8TCN5 953 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 SLC2A14Q8TDB8 520 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 BIRC7Q96CA5 298 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 AGPAT3Q9NRZ7 376 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 ELOVL2Q9NXB9 296 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 TP53BP1Q12888 1972 aaPredicted RBP12.48□□□□□ -0.41
HCFC1-204ENST00000461098 MYO18BQ8IUG5 2567 aa12.48□□□□□ -0.41
HCFC1-204ENST00000461098 MYLKQ15746 1914 aa12.47□□□□□ -0.41
HCFC1-204ENST00000461098 A0A1W2PQH9 124 aa12.47□□□□□ -0.41
HCFC1-204ENST00000461098 CBX4O00257 560 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms