RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 DNMT3LQ9UJW3 386 aa9.25□□□□□ -0.93
SOX2-OT-202ENST00000461063 NAGPAQ9UK23 515 aa9.25□□□□□ -0.93
SOX2-OT-202ENST00000461063 USP3Q9Y6I4 520 aa9.25□□□□□ -0.93
SOX2-OT-202ENST00000461063 SPAG17Q6Q759 2223 aa9.25□□□□□ -0.93
SOX2-OT-202ENST00000461063 CACNA1BQ00975 2339 aa9.25□□□□□ -0.93
SOX2-OT-202ENST00000461063 RALGAPA1Q6GYQ0 2036 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 MAP1BP46821 2468 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 GIPC1O14908 333 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 STC2O76061 302 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 KLKB1P03952 638 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 CISD3P0C7P0 127 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 HOXB2P14652 356 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 ITPKAP23677 461 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 MXI1P50539 228 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 NOVA1P51513 510 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 RAD23BP54727 409 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 EDRF1Q3B7T1 1238 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 TRIM61Q5EBN2 209 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 LYSMD4Q5XG99 296 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 SYT12Q8IV01 421 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 CHPFQ8IZ52 775 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 ZNF276Q8N554 614 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 TTC39CQ8N584 583 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 SLC4A11Q8NBS3 891 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 FBXL13Q8NEE6 735 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 BHMTQ93088 406 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 TMEM176AQ96HP8 235 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 HEXIM2Q96MH2 286 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 ARID3AQ99856 593 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 GABRG3Q99928 467 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 DNAI2Q9GZS0 605 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 GDPD2Q9HCC8 539 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 CISHQ9NSE2 258 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 RAB20Q9NX57 234 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 CALCOCO1Q9P1Z2 691 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 PILRBQ9UKJ0 227 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 ATP6V1DQ9Y5K8 247 aa9.24□□□□□ -0.93
SOX2-OT-202ENST00000461063 CFAP47Q6ZTR5 3102 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 ZZEF1O43149 2961 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 IGHV1OR15-9A0A0B4J2B8 117 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 TK2O00142 265 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 CETN3O15182 167 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 AP5Z1O43299 807 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 STX10O60499 249 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 PENKP01210 267 aaPredicted RBP9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 RALAP11233 206 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 NDUFV2P19404 249 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 CSRP1P21291 193 aaKnown RBP9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 DGKGP49619 791 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 RPL6Q02878 288 aaKnown RBP9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 EFEMP1Q12805 493 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 LMAN2Q12907 356 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 PNOCQ13519 176 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 CBWD6Q4V339 395 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 RAB41Q5JT25 222 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 CBWD3Q5JTY5 395 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 CBWD5Q5RIA9 395 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 SH3PXD2AQ5TCZ1 1133 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 ARHGAP17Q68EM7 881 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 SDE2Q6IQ49 451 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 KIAA1211LQ6NV74 962 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 SLC23A3Q6PIS1 610 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 SLC36A4Q6YBV0 504 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 TADA2BQ86TJ2 420 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 DEFB119Q8N690 84 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 IPO4Q8TEX9 1081 aaKnown RBP9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 TATDN2Q93075 761 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 ERLEC1Q96DZ1 483 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 CDK5RAP1Q96SZ6 601 aaKnown RBP9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 KCNK17Q96T54 332 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 NUSAP1Q9BXS6 441 aaKnown RBP9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 UBXN6Q9BZV1 441 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 CACNA2D2Q9NY47 1150 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 PLK2Q9NYY3 685 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 RASAL2Q9UJF2 1139 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 FBXO10Q9UK96 956 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 ATXN2Q99700 1313 aaKnown RBP9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 ABCA7Q8IZY2 2146 aa9.23□□□□□ -0.93
SOX2-OT-202ENST00000461063 WASH3PC4AMC7 463 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 GFRA2O00451 464 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 ZNF217O75362 1048 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 HMBSP08397 361 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 EPB41P11171 864 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 CEACAM1P13688 526 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 ENGP17813 658 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 CORO1AP31146 461 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 HOXD12P35452 270 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 DPP6P42658 865 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 PRCPP42785 496 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 MAPK8P45983 427 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 YWHAGP61981 247 aaKnown RBP eCLIP9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 COG7P83436 770 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 ZNF252P-AS1Q0IIN9 211 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 UAP1L1Q3KQV9 507 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 FYB2Q5VWT5 728 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 PM20D1Q6GTS8 502 aa9.22□□□□□ -0.93
SOX2-OT-202ENST00000461063 PIGZQ86VD9 579 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms