RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 PRDM12Q9H4Q4 367 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 CYP4F11Q9HBI6 524 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 SIX2Q9NPC8 291 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 GTF3C4Q9UKN8 822 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 CNTN6Q9UQ52 1028 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 ASB3Q9Y575 518 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 MICAL3Q7RTP6 2002 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 HTTP42858 3142 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 CLASP2O75122 1294 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 GFPT2O94808 682 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 NOL4O94818 638 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ABLIM3O94929 683 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 CSPG5O95196 566 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 RTN3O95197 1032 aaPredicted RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 FGF19O95750 216 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 SERPING1P05155 500 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 HNRNPA1P09651 372 aaKnown RBP eCLIP6.27□□□□□ -1.41
NUP98-208ENST00000461047 FAM200BP0CF97 657 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 SETSIPP0DME0 302 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 HOXB8P17481 243 aaPredicted RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 DESP17661 470 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ACO1P21399 889 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 ACAT1P24752 427 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 LMO2P25791 158 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 CASP14P31944 242 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 PBX1P40424 430 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 MAGEA11P43364 429 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ACADSBP45954 432 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 NRIP1P48552 1158 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 RAD23BP54727 409 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 PSMC1P62191 440 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 ROR1Q01973 937 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ARID5AQ03989 594 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 MEA1Q16626 185 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 MGAT5BQ3V5L5 792 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 CFAP221Q4G0U5 840 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 PABPC1LQ4VXU2 614 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 TDRD12Q587J7 1177 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 PPM1LQ5SGD2 360 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ARHGAP17Q68EM7 881 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 CES5AQ6NT32 575 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 FAM171BQ6P995 826 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 GJB7Q6PEY0 223 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 EP400NLQ6ZTU2 488 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 SCN4BQ8IWT1 228 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 TCEAL8Q8IYN2 117 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 TXLNBQ8N3L3 684 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ANKRD52Q8NB46 1076 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 LEMD2Q8NC56 503 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 TMEM35BQ8NCS4 154 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 GDPD5Q8WTR4 605 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ZNF606Q8WXB4 792 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 AUTS2Q8WXX7 1259 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 GOLGA1Q92805 767 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ZNF512Q96ME7 567 aaPredicted RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 KREMEN1Q96MU8 473 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 HNRNPABQ99729 332 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 CLSTN3Q9BQT9 956 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.27□□□□□ -1.41
NUP98-208ENST00000461047 VN1R3Q9BXE9 311 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 NAA15Q9BXJ9 866 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 DUSP16Q9BY84 665 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 UBXN6Q9BZV1 441 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ZNF518BQ9C0D4 1074 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 SDCBP2Q9H190 292 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 SEMA6CQ9H3T2 930 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 DEF6Q9H4E7 631 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 SYNCQ9H7C4 482 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 LRRC4Q9HBW1 653 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 LRRC4CQ9HCJ2 640 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 DMAP1Q9NPF5 467 aaPredicted RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 SEPT11Q9NVA2 429 aaKnown RBP6.27□□□□□ -1.41
NUP98-208ENST00000461047 COMMD8Q9NX08 183 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 ZDHHC7Q9NXF8 308 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 AIPL1Q9NZN9 384 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 FAM50BQ9Y247 325 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 FHOD1Q9Y613 1164 aa6.27□□□□□ -1.41
NUP98-208ENST00000461047 MYBPHLA2RUH7 354 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 ANKRD62A6NC57 917 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 LRRC53A6NM62 1247 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 FAM170BA6NMN3 283 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 HIDE1A8MVS5 230 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 RFXAPO00287 272 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 ZNF197O14709 1029 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 TGM5O43548 720 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 TBC1D4O60343 1298 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 ATP2C2O75185 946 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 LSM8O95777 96 aaKnown RBP6.26□□□□□ -1.41
NUP98-208ENST00000461047 CSH1P0DML2 217 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 CSH2P0DML3 217 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 HAPLN1P10915 354 aaPredicted RBP6.26□□□□□ -1.41
NUP98-208ENST00000461047 FOSL2P15408 326 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 CYP11B1P15538 503 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 RPL17P18621 184 aaKnown RBP6.26□□□□□ -1.41
NUP98-208ENST00000461047 BDNFP23560 247 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 IGFBP6P24592 240 aaPredicted RBP6.26□□□□□ -1.41
NUP98-208ENST00000461047 DNAJB1P25685 340 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 ADORA2BP29275 332 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 HOXA9P31269 272 aa6.26□□□□□ -1.41
NUP98-208ENST00000461047 ADMP35318 185 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms