RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 DTNAQ9Y4J8 743 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 MROH7Q68CQ1 1323 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 WDR27A2RRH5 827 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 SPATA31C2B4DYI2 1134 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 E9PBE3 544 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 TRDMT1O14717 391 aaKnown RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 KLHL41O60662 606 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 SERPINE1P05121 402 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 ALADP13716 330 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 HDAC4P56524 1084 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 TMPRSS6Q8IU80 811 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 ALLCQ8N6M5 410 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 CINPQ9BW66 212 aaPredicted RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 NCKIPSDQ9NZQ3 722 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 PRRG1O14668 218 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 GRIN3BO60391 1043 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 TRMT5Q32P41 509 aaKnown RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 WASHC2DQ5SRD0 308 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 C9orf131Q5VYM1 1079 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 RNF217Q8TC41 542 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 NAF1Q96HR8 494 aaKnown RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 CEP19Q96LK0 163 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 KREMEN1Q96MU8 473 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 ABHD16BQ9H3Z7 469 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 THAP1Q9NVV9 213 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 SALL4Q9UJQ4 1053 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 IRF1P10914 325 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 FECHP22830 423 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 MGAT1P26572 445 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 CLK2P49760 499 aaKnown RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 ITGA9Q13797 1035 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 RFWD2Q8NHY2 731 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 PDP2Q9P2J9 529 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 MOSPD1Q9UJG1 213 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 SUFUQ9UMX1 484 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 RNF103O00237 685 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 UPP2O95045 317 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 ABHD2P08910 425 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 PGAM1P18669 254 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 RPL7AP62424 266 aaKnown RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 CDH17Q12864 832 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 CELF3Q5SZQ8 465 aaKnown RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 GRAMD4Q6IC98 578 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 BNC2Q6ZN30 1099 aaPredicted RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 APTXQ7Z2E3 356 aaKnown RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 MYLK2Q9H1R3 596 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 WDR70Q9NW82 654 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 TIMM13Q9Y5L4 95 aaPredicted RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 DISP2A7MBM2 1401 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 HACD1B0YJ81 288 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 KCNK1O00180 336 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 LGALS2P05162 132 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 ADORA2AP29274 412 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 AKT1P31749 480 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 RPA3P35244 121 aaPredicted RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 SLC11A2P49281 568 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 CLEC4FQ8N1N0 589 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 EDEM1Q92611 657 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 FBXO32Q969P5 355 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 OXNAD1Q96HP4 312 aaPredicted RBP15.19■□□□□ 0.02
PTPRU-205ENST00000460170 TMEM237Q96Q45 408 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 PCDHB18PQ96TA0 734 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 BTBD10Q9BSF8 475 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 PCDHB8Q9UN66 801 aa15.19■□□□□ 0.02
PTPRU-205ENST00000460170 SERPINB3P29508 390 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 SOX11P35716 441 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 CHKAP35790 457 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 POU4F1Q01851 419 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 CYLC2Q14093 348 aaPredicted RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 C15orf59Q2T9L4 293 aaPredicted RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 PDPK2PQ6A1A2 396 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 SEMA4DQ92854 862 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 TUBGCP3Q96CW5 907 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 GPBP1L1Q9HC44 474 aaPredicted RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 FKBP6O75344 327 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 RBP1P09455 135 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 ZNF143P52747 638 aaPredicted RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 TMEM132BQ14DG7 1078 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 ACO2Q99798 780 aaKnown RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 BRD8Q9H0E9 1235 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 ADNPQ9H2P0 1102 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 CYP4F12Q9HCS2 524 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 RBM22Q9NW64 420 aaKnown RBP eCLIP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 PDHXO00330 501 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 CLASP2O75122 1294 aaKnown RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 MAP4P27816 1152 aaKnown RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 RPL22P35268 128 aaKnown RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 TNFSF9P41273 254 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 SLC1A6P48664 564 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 VGLL4Q14135 290 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 CRYMQ14894 314 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 GRTP1Q5TC63 336 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 GPC2Q8N158 579 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 TDRD5Q8NAT2 981 aaKnown RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 CELF6Q96J87 481 aaKnown RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 PIH1D1Q9NWS0 290 aaKnown RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 TRMT6Q9UJA5 497 aaKnown RBP15.18■□□□□ 0.02
PTPRU-205ENST00000460170 KDM4FA0A1W2PPD8 638 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 CASTOR2A6NHX0 329 aa15.18■□□□□ 0.02
PTPRU-205ENST00000460170 C2orf81A6NN90 581 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms