RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ZC3H14Q6PJT7 736 aaKnown RBP21.67■■□□□ 1.06
VARS-218ENST00000459667 TPGS1Q6ZTW0 290 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 WDTC1Q8N5D0 677 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 NOX5Q96PH1 765 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 PNKPQ96T60 521 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 BBS2Q9BXC9 721 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 PDCL3Q9H2J4 239 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 MARK1Q9P0L2 795 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 DAAM1Q9Y4D1 1078 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 CEP83Q9Y592 693 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 NEDD8-MDP1E9PL57 170 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 EPHB6O15197 1021 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 MSI1O43347 362 aaKnown RBP21.66■■□□□ 1.06
VARS-218ENST00000459667 NCAM1P13591 858 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 TPM4P67936 248 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 TRIP4Q15650 581 aaPredicted RBP21.66■■□□□ 1.06
VARS-218ENST00000459667 DENND1CQ8IV53 801 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 ETFBKMTQ8IXQ9 262 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 NAT16Q8N8M0 369 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 NEK11Q8NG66 645 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 PPP1R13BQ96KQ4 1090 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 ERGIC2Q96RQ1 377 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 CPXM1Q96SM3 734 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 NLRC4Q9NPP4 1024 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 ARHGEF4Q9NR80 690 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 C2orf42Q9NWW7 574 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 TJP2Q9UDY2 1190 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 AGO1Q9UL18 857 aaKnown RBP21.66■■□□□ 1.06
VARS-218ENST00000459667 R4GN57 208 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 ATG2BQ96BY7 2078 aa21.66■■□□□ 1.06
VARS-218ENST00000459667 FANCMQ8IYD8 2048 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 ATG13O75143 517 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 TULP3O75386 442 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 KAT7O95251 611 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 PAPSS2O95340 614 aaPredicted RBP21.65■■□□□ 1.06
VARS-218ENST00000459667 APODP05090 189 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 TDGF1P13385 188 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 CHKAP35790 457 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 TAF3Q5VWG9 929 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 RPLP0P6Q8NHW5 317 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 CCDC26Q8TAB7 109 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 SPAG5Q96R06 1193 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 TRIM62Q9BVG3 475 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 WDR35Q9P2L0 1181 aa21.65■■□□□ 1.06
VARS-218ENST00000459667 CHURC1-FNTBB4DL54 471 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 PROB1E7EW31 1015 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 K7EQS6 105 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 GFPT2O94808 682 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 FYNP06241 537 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 TYRP14679 529 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 HARS2P49590 506 aaKnown RBP21.64■■□□□ 1.05
VARS-218ENST00000459667 SEC13P55735 322 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 JAM2P57087 298 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 MESP2Q0VG99 397 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 IQCB1Q15051 598 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 NFKBIBQ15653 356 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 NOP9Q86U38 636 aaKnown RBP21.64■■□□□ 1.05
VARS-218ENST00000459667 PHTF2Q8N3S3 785 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 DQX1Q8TE96 717 aaKnown RBP21.64■■□□□ 1.05
VARS-218ENST00000459667 IPO4Q8TEX9 1081 aaKnown RBP21.64■■□□□ 1.05
VARS-218ENST00000459667 XPO6Q96QU8 1125 aaKnown RBP21.64■■□□□ 1.05
VARS-218ENST00000459667 FAM126AQ9BYI3 521 aaPredicted RBP21.64■■□□□ 1.05
VARS-218ENST00000459667 POPDC2Q9HBU9 364 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 ZSCAN32Q9NX65 697 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 DEC1Q9P2X7 70 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 NAALADL1Q9UQQ1 740 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 PCDHGA2Q9Y5H1 932 aa21.64■■□□□ 1.05
VARS-218ENST00000459667 CAPN9O14815 690 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 CACNG3O60359 315 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 SOX5P35711 763 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 GRIA2P42262 883 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 MRE11P49959 708 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 SNX16P57768 344 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 PREPLQ4J6C6 727 aaPredicted RBP21.63■■□□□ 1.05
VARS-218ENST00000459667 PTPN20Q4JDL3 420 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 BEND5Q7L4P6 421 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 ALYREFQ86V81 257 aaKnown RBP21.63■■□□□ 1.05
VARS-218ENST00000459667 TMEM35BQ8NCS4 154 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 EPS8L1Q8TE68 723 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 DDX1Q92499 740 aaKnown RBP21.63■■□□□ 1.05
VARS-218ENST00000459667 NELL1Q92832 810 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 BHMTQ93088 406 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 ACDQ96AP0 544 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 PIWIL1Q96J94 861 aaKnown RBP21.63■■□□□ 1.05
VARS-218ENST00000459667 SERPINB11Q96P15 392 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 SYNCQ9H7C4 482 aa21.63■■□□□ 1.05
VARS-218ENST00000459667 DNAJC17Q9NVM6 304 aaKnown RBP21.63■■□□□ 1.05
VARS-218ENST00000459667 K7ESF4 209 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 IGLV3-27P01718 113 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 ERBB2P04626 1255 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 CDH5P33151 784 aaPredicted RBP21.62■■□□□ 1.05
VARS-218ENST00000459667 NRLP54845 237 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 TBX4P57082 545 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 YWHAZP63104 245 aaKnown RBP21.62■■□□□ 1.05
VARS-218ENST00000459667 GRAMD4Q6IC98 578 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 OR6B2Q6IFH4 312 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 FAM183BPQ6ZVS7 135 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 SFTPA1Q8IWL2 248 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 FAM217AQ8IXS0 508 aa21.62■■□□□ 1.05
VARS-218ENST00000459667 CPXM2Q8N436 756 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms