RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CUL1Q13616 776 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 SYDE1Q6ZW31 735 aaPredicted RBP25.39■■□□□ 1.66
U2AF1-204ENST00000459639 SND1Q7KZF4 910 aaKnown RBP eCLIP25.39■■□□□ 1.66
U2AF1-204ENST00000459639 TAC4Q86UU9 113 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 STKLD1Q8NE28 680 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 ATL2Q8NHH9 583 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 ZNF461Q8TAF7 563 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 ADAM32Q8TC27 787 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 CASKIN2Q8WXE0 1202 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 RAD9AQ99638 391 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 ERP44Q9BS26 406 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 COX16Q9P0S2 106 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 RCOR3Q9P2K3 495 aaPredicted RBP25.39■■□□□ 1.66
U2AF1-204ENST00000459639 A0A1W2PQH9 124 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 ESYT3A0FGR9 886 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 APOC4-APOC2K7ER74 178 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 FGF18O76093 207 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 APOC2P02655 101 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 IL4RP24394 825 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 DYNLT1P63172 113 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 CREMQ03060 361 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.39■■□□□ 1.65
U2AF1-204ENST00000459639 KCTD15Q96SI1 283 aaPredicted RBP25.39■■□□□ 1.65
U2AF1-204ENST00000459639 SMOC2Q9H3U7 446 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 NMUR1Q9HB89 426 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.39■■□□□ 1.65
U2AF1-204ENST00000459639 MRPL17Q9NRX2 175 aaKnown RBP25.39■■□□□ 1.65
U2AF1-204ENST00000459639 TMEM51Q9NW97 253 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 MTMR10Q9NXD2 777 aa25.39■■□□□ 1.65
U2AF1-204ENST00000459639 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.39■■□□□ 1.65
U2AF1-204ENST00000459639 ZMYND8Q9ULU4 1186 aaPredicted RBP25.39■■□□□ 1.65
U2AF1-204ENST00000459639 GAS8O95995 478 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 MYBL2P10244 700 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 GBP1P32455 592 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 CXCR3P49682 368 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 LMNB2Q03252 620 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 RAB33AQ14088 237 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 ANKRD20A8PQ5CZ79 823 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 PPP6R3Q5H9R7 873 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-204ENST00000459639 EFHC2Q5JST6 749 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.38■■□□□ 1.65
U2AF1-204ENST00000459639 NKD2Q969F2 451 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-204ENST00000459639 FBXO32Q969P5 355 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 LBHD1Q9BQE6 289 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-204ENST00000459639 FAM114A2Q9NRY5 505 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 FNIP2Q9P278 1114 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 FBXW11Q9UKB1 542 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 SSX2IPQ9Y2D8 614 aa25.38■■□□□ 1.65
U2AF1-204ENST00000459639 ATF2P15336 505 aa25.37■■□□□ 1.65
U2AF1-204ENST00000459639 ATP2A2P16615 1042 aaKnown RBP25.37■■□□□ 1.65
U2AF1-204ENST00000459639 ATF6P18850 670 aa25.37■■□□□ 1.65
U2AF1-204ENST00000459639 PSEN1P49768 467 aa25.37■■□□□ 1.65
U2AF1-204ENST00000459639 RBM10P98175 930 aaKnown RBP25.37■■□□□ 1.65
U2AF1-204ENST00000459639 BYSLQ13895 437 aaKnown RBP25.37■■□□□ 1.65
U2AF1-204ENST00000459639 BEND6Q5SZJ8 279 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-204ENST00000459639 DUPD1Q68J44 220 aa25.37■■□□□ 1.65
U2AF1-204ENST00000459639 GPR152Q8TDT2 470 aa25.37■■□□□ 1.65
U2AF1-204ENST00000459639 CCDC114Q96M63 670 aa25.37■■□□□ 1.65
U2AF1-204ENST00000459639 ZBP1Q9H171 429 aa25.37■■□□□ 1.65
U2AF1-204ENST00000459639 GMIPQ9P107 970 aa25.37■■□□□ 1.65
U2AF1-204ENST00000459639 ADRA1BP35368 520 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 CARSP49589 748 aaKnown RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 PGFP49763 221 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 DRG2P55039 364 aaKnown RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 VCPP55072 806 aaKnown RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 EIF4EBP2Q13542 120 aaPredicted RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 ARL13BQ3SXY8 428 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 SLC9A4Q6AI14 798 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 MSANTD2Q6P1R3 559 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 SLC35B2Q8TB61 432 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 ACTL9Q8TC94 416 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 AENQ8WTP8 325 aaKnown RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 HAUS1Q96CS2 278 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 FAM118BQ9BPY3 351 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 TTLL2Q9BWV7 592 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 PRDM16Q9HAZ2 1276 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 DNPEPQ9ULA0 475 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 DRG1Q9Y295 367 aaKnown RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 SLC38A8A6NNN8 435 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 IRAK2O43187 625 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 TLL1O43897 1013 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 TGM2P21980 687 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 ARL4AP40617 200 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 OTUD4Q01804 1114 aaKnown RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 PPP1R7Q15435 360 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 GSPT2Q8IYD1 628 aaKnown RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 PQLC3Q8N755 202 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 PCDH19Q8TAB3 1148 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 RNF139Q8WU17 664 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 IFT81Q8WYA0 676 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 TLR8Q9NR97 1041 aaKnown RBP25.36■■□□□ 1.65
U2AF1-204ENST00000459639 CLIC5Q9NZA1 410 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 MAFFQ9ULX9 164 aa25.36■■□□□ 1.65
U2AF1-204ENST00000459639 APOL1O14791 398 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 LILRB3O75022 631 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 SEC31AO94979 1220 aaKnown RBP25.35■■□□□ 1.65
U2AF1-204ENST00000459639 CTSAP10619 480 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 DNAJB2P25686 324 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 PTK6Q13882 451 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 OASLQ15646 514 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms