RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 KRT37O76014 449 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 USP1O94782 785 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 RPS12P25398 132 aaKnown RBP14.65□□□□□ -0.06
SCFD1-203ENST00000458591 RXRBP28702 533 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 VHLP40337 213 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 PHKA2P46019 1235 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 OCRLQ01968 901 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 TFDP2Q14188 446 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 LRRC74BQ6ZQY2 392 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 RIOX2Q8IUF8 465 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 ZNF483Q8TF39 744 aaPredicted RBP14.65□□□□□ -0.06
SCFD1-203ENST00000458591 NDRG1Q92597 394 aaKnown RBP14.65□□□□□ -0.06
SCFD1-203ENST00000458591 FAM136AQ96C01 138 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 THTPAQ9BU02 230 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 APOL6Q9BWW8 343 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 PNPLA8Q9NP80 782 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 KRT82Q9NSB4 513 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.65□□□□□ -0.065e-6■■■■□ 22.2
SCFD1-203ENST00000458591 DLGAP2Q9P1A6 1054 aa14.65□□□□□ -0.06
SCFD1-203ENST00000458591 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.65□□□□□ -0.07
SCFD1-203ENST00000458591 LGR5O75473 907 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 ARF4P18085 180 aaPredicted RBP14.65□□□□□ -0.07
SCFD1-203ENST00000458591 PRKCHP24723 683 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 HDAC4P56524 1084 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 RPL10AP62906 217 aaKnown RBP14.65□□□□□ -0.07
SCFD1-203ENST00000458591 SLC34A1Q06495 639 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 OLIG2Q13516 323 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 ZRSR2Q15696 482 aaKnown RBP14.65□□□□□ -0.07
SCFD1-203ENST00000458591 FAM47CQ5HY64 1035 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 RNF220Q5VTB9 566 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 OLFML1Q6UWY5 402 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 ZNF778Q96MU6 729 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 RILPQ96NA2 401 aa14.65□□□□□ -0.07
SCFD1-203ENST00000458591 WDR27A2RRH5 827 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 I3L4J1 428 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 PAPSS1O43252 624 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-203ENST00000458591 TSHRP16473 764 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 CYP2F1P24903 491 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 KLC1Q07866 573 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 KRT72Q14CN4 511 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 BSPRYQ5W0U4 402 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 CES3Q6UWW8 571 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 DENND5BQ6ZUT9 1274 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 EFCAB3Q8N7B9 438 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 POU5F2Q8N7G0 328 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.64□□□□□ -0.07
SCFD1-203ENST00000458591 FAM167AQ96KS9 214 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 PANX3Q96QZ0 392 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 DDX50Q9BQ39 737 aaKnown RBP14.64□□□□□ -0.07
SCFD1-203ENST00000458591 DPEP3Q9H4B8 488 aa14.64□□□□□ -0.07
SCFD1-203ENST00000458591 DHX35Q9H5Z1 703 aaKnown RBP14.64□□□□□ -0.07
SCFD1-203ENST00000458591 BARX2Q9UMQ3 279 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-203ENST00000458591 CNMDO75829 334 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 IL18RAPO95256 599 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
SCFD1-203ENST00000458591 INSRRP14616 1297 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 KCNA4P22459 653 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 PEX6Q13608 980 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 THEMIS2Q5TEJ8 643 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 SLC9A4Q6AI14 798 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 MOB2Q70IA6 237 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 C7orf31Q8N865 590 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 USP6NLQ92738 828 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 KLC2Q9H0B6 622 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 DPP3Q9NY33 737 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 SIRPGQ9P1W8 387 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 SMAPO00193 183 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 C22orf31O95567 290 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 GSRP00390 522 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 MXRA7P84157 204 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 LBRQ14739 615 aaKnown RBP14.63□□□□□ -0.07
SCFD1-203ENST00000458591 TMEM132DQ14C87 1099 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 ACAP1Q15027 740 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 PPM1JQ5JR12 505 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 KCNT2Q6UVM3 1135 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 LCLAT1Q6UWP7 414 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 RSPH3Q86UC2 560 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 SMC1BQ8NDV3 1235 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 STKLD1Q8NE28 680 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 STMN2Q93045 179 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 NRDE2Q9H7Z3 1164 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 PLA2G4CQ9UP65 541 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 AKT3Q9Y243 479 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 PSAT1Q9Y617 370 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 ANK1P16157 1881 aa14.63□□□□□ -0.07
SCFD1-203ENST00000458591 IRF6O14896 467 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 KLF11O14901 512 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 BPGMP07738 259 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 C6orf222P0C671 652 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-203ENST00000458591 TXNP10599 105 aaKnown RBP14.62□□□□□ -0.07
SCFD1-203ENST00000458591 TGFB3P10600 412 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 SDC4P31431 198 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 CCNFP41002 786 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 SLC25A3Q00325 362 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 GLRA4Q5JXX5 417 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 ZNF772Q68DY9 489 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-203ENST00000458591 CASC4Q6P4E1 433 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 RIPOR1Q6ZS17 1223 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 PLPPR4Q7Z2D5 763 aa14.62□□□□□ -0.07
SCFD1-203ENST00000458591 TP53INP2Q8IXH6 220 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms