RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 EIF2AQ9BY44 585 aaKnown RBP14.07□□□□□ -0.16
TOP3B-213ENST00000457179 ABHD16BQ9H3Z7 469 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 CYLDQ9NQC7 956 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 PIN4Q9Y237 131 aaKnown RBP14.07□□□□□ -0.16
TOP3B-213ENST00000457179 TNPO2O14787 897 aaKnown RBP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 PPEF2O14830 753 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 TCEA3O75764 348 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 CYP2C9P11712 490 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 AQP4P55087 323 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 MMEL1Q495T6 779 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 SFT2D3Q587I9 215 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 DNAJC24Q6P3W2 148 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 ACAD11Q709F0 780 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 CCDC110Q8TBZ0 833 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 NMUR2Q9GZQ4 415 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 FZD8Q9H461 694 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 SMG5Q9UPR3 1016 aaKnown RBP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 PAPPA2Q9BXP8 1791 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 A8MXQ7 604 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 FCHO1O14526 889 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 TREHO43280 583 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 PGK1P00558 417 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 MMP3P08254 477 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 GCAP28676 217 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 TCEAL1Q15170 157 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 SLC10A6Q3KNW5 377 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 SLC44A4Q53GD3 710 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 DENND1BQ6P3S1 775 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 ZBTB8BQ8NAP8 495 aaPredicted RBP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 PPTC7Q8NI37 304 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 LRRN4Q8WUT4 740 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 C18orf25Q96B23 403 aaPredicted RBP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 PRPF4O43172 522 aaKnown RBP eCLIP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 STRNO43815 780 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 RARBP10826 455 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 TBXAS1P24557 533 aaPredicted RBP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 CRABP2P29373 138 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 OGDHQ02218 1023 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 LRRC8BQ6P9F7 803 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 TLK2Q86UE8 772 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 RBM15BQ8NDT2 890 aaKnown RBP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 FEZF2Q8TBJ5 459 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 MTBPQ96DY7 904 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 HPDLQ96IR7 371 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 ACAP3Q96P50 834 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 TSSK1BQ9BXA7 367 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 MAF1Q9H063 256 aa14.06□□□□□ -0.16
TOP3B-213ENST00000457179 IQCGQ9H095 443 aaKnown RBP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 PRMT7Q9NVM4 692 aaPredicted RBP14.06□□□□□ -0.16
TOP3B-213ENST00000457179 MEI4A8MW99 385 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 FAM189A1O60320 539 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 MYL2P10916 166 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 RGS2P41220 211 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 RASA2Q15283 850 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 MAMDC4Q6UXC1 1216 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 B3GNT6Q6ZMB0 384 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 TSHZ1Q6ZSZ6 1077 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 CCDC33Q8N5R6 958 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 CFAP57Q96MR6 1250 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 TMEM121Q9BTD3 319 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 NXF3Q9H4D5 531 aaKnown RBP14.05□□□□□ -0.16
TOP3B-213ENST00000457179 PDZD7Q9H5P4 517 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 MRPL47Q9HD33 250 aaKnown RBP14.05□□□□□ -0.16
TOP3B-213ENST00000457179 AVENQ9NQS1 362 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-213ENST00000457179 EURLQ9NYK6 297 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 CIDEBQ9UHD4 219 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 SIX4Q9UIU6 781 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 SH3GLB1Q9Y371 365 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 IGKV6-21A0A0C4DH24 114 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 ARHGAP42A6NI28 874 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 M0QYV0 167 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 SLC1A1P43005 524 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 NRLP54845 237 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 LMNB2Q03252 620 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 GPS1Q13098 491 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 CYLC2Q14093 348 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-213ENST00000457179 DUSP28Q4G0W2 176 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 C12orf50Q8NA57 414 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-213ENST00000457179 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 TUBB6Q9BUF5 446 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 GRIP2Q9C0E4 1043 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 SLC17A7Q9P2U7 560 aa14.05□□□□□ -0.16
TOP3B-213ENST00000457179 ZC3H11AO75152 810 aaKnown RBP eCLIP14.04□□□□□ -0.16
TOP3B-213ENST00000457179 CDK4P11802 303 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 SLC26A2P50443 739 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ARSEP51690 589 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 CDK16Q00536 496 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ASPHQ12797 758 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 PTK6Q13882 451 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 TMEM132DQ14C87 1099 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 TMEM259Q4ZIN3 620 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 SCYL2Q6P3W7 929 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 KLHDC10Q6PID8 442 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ANKMY2Q8IV38 441 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ULK2Q8IYT8 1036 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 GRK7Q8WTQ7 553 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 LZICQ8WZA0 190 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 CCDC124Q96CT7 223 aaKnown RBP14.04□□□□□ -0.16
TOP3B-213ENST00000457179 DGCR14Q96DF8 476 aaKnown RBP14.04□□□□□ -0.16
TOP3B-213ENST00000457179 TRIM11Q96F44 468 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms