RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ANKRD35Q8N283 1001 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 GDAP1Q8TB36 358 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SH3RF3Q8TEJ3 882 aaPredicted RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 RUBCNQ92622 972 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 INTS12Q96CB8 462 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 MBD6Q96DN6 1003 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 PPP1R13BQ96KQ4 1090 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CCDC140Q96MF4 163 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TCEANC2Q96MN5 208 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 WRNIP1Q96S55 665 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TMEM209Q96SK2 561 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TSG101Q99816 390 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 DDX50Q9BQ39 737 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 KIFC3Q9BVG8 833 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ACPTQ9BZG2 426 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ZCWPW1Q9H0M4 648 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 C1orf21Q9H246 121 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 GHITMQ9H3K2 345 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 BICC1Q9H694 974 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 XKR8Q9H6D3 395 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 PDE7BQ9NP56 450 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ITM2CQ9NQX7 267 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ANO10Q9NW15 660 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CLDND1Q9NY35 253 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 GGA3Q9NZ52 723 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 MOCS1Q9NZB8 636 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SUCLA2Q9P2R7 463 aaPredicted RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 AMACRQ9UHK6 382 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CDC23Q9UJX2 597 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SCAF8Q9UPN6 1271 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 PTPN22Q9Y2R2 807 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 C15orf41Q9Y2V0 281 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 PTCH1Q13635 1447 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 NUP188Q5SRE5 1749 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TARSL2A2RTX5 802 aaKnown RBP5.7□□□□□ -1.5
VPS41-209ENST00000457055 RGSL1A5PLK6 1076 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 NPEPPSL1A6NEC2 478 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 CAPN14A8MX76 684 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 TMEM232C9JQI7 657 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 TRAF5O00463 557 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 AP3D1O14617 1153 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 TPP1O14773 563 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 ZW10O43264 779 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 SUSD5O60279 629 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 ATP6V1G1O75348 118 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 SOAT2O75908 522 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 FLOT1O75955 427 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 DDAH1O94760 285 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 ALDH1A2O94788 518 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 NPTXRO95502 500 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 C6P13671 934 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 LCP1P13796 627 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 ACAT1P24752 427 aaKnown RBP5.7□□□□□ -1.5
VPS41-209ENST00000457055 MCM3P25205 808 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 CHMLP26374 656 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 PRKAR2BP31323 418 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 LIFRP42702 1097 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 FNTAP49354 379 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 PRELPP51888 382 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 MLLT6P55198 1093 aaPredicted RBP5.7□□□□□ -1.5
VPS41-209ENST00000457055 CBX1P83916 185 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 KRT17Q04695 432 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 SLC14A1Q13336 389 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 DOC2AQ14183 400 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 ICAM4Q14773 271 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 CRYMQ14894 314 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 STK38Q15208 465 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 DHCR24Q15392 516 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 MAPRE2Q15555 327 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 SF1Q15637 639 aaKnown RBP5.7□□□□□ -1.5
VPS41-209ENST00000457055 SMAD1Q15797 465 aaKnown RBP5.7□□□□□ -1.5
VPS41-209ENST00000457055 FBXO43Q4G163 708 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 KANK2Q63ZY3 851 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 HAUS3Q68CZ6 603 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 IYDQ6PHW0 289 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 IL27RAQ6UWB1 636 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 ZNF783Q6ZMS7 281 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 SRGAP1Q7Z6B7 1085 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 C2orf69Q8N8R5 385 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 KCNH5Q8NCM2 988 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 TTLL11Q8NHH1 800 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 LILRB4Q8NHJ6 448 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 CEP76Q8TAP6 659 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 IFI44Q8TCB0 444 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 ZCCHC14Q8WYQ9 949 aaKnown RBP5.7□□□□□ -1.5
VPS41-209ENST00000457055 KRT35Q92764 455 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 SLC35B4Q969S0 331 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 ZNF669Q96BR6 464 aaPredicted RBP5.7□□□□□ -1.5
VPS41-209ENST00000457055 DTNBP1Q96EV8 351 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 FUBP3Q96I24 572 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS41-209ENST00000457055 VPS50Q96JG6 964 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 CABS1Q96KC9 395 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 RIPOR3Q96MK2 946 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 TTC1Q99614 292 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 TBCDQ9BTW9 1192 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 HGH1Q9BTY7 390 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 OR10A4Q9H209 315 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 EPB41L1Q9H4G0 881 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 NMRK2Q9NPI5 230 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 COX16Q9P0S2 106 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms