RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SLC47A2Q86VL8 602 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 DENND1CQ8IV53 801 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 UNC45BQ8IWX7 931 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 IPO4Q8TEX9 1081 aaKnown RBP24.21■■□□□ 1.47
CBX3-204ENST00000456948 PPP1R13BQ96KQ4 1090 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 MARK1Q9P0L2 795 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 MYOFQ9NZM1 2061 aa24.2■■□□□ 1.47
CBX3-204ENST00000456948 USP34Q70CQ2 3546 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 TBC1D3BA6NDS4 549 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 LGALS16A8MUM7 142 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 GREM1O60565 184 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 KAT7O95251 611 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 TNFRSF4P43489 277 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 ZNF445P59923 1031 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 MSANTD2Q6P1R3 559 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 BEND5Q7L4P6 421 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 NAT16Q8N8M0 369 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 TMEM35BQ8NCS4 154 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 MSANTD4Q8NCY6 345 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 NEK11Q8NG66 645 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 WBP2Q969T9 261 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 SPAG5Q96R06 1193 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 NAA15Q9BXJ9 866 aaKnown RBP24.2■■□□□ 1.46
CBX3-204ENST00000456948 FAM207AQ9NSI2 230 aaPredicted RBP24.2■■□□□ 1.46
CBX3-204ENST00000456948 R4GN57 208 aa24.2■■□□□ 1.46
CBX3-204ENST00000456948 PRR23AA6NEV1 266 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 NEDD8-MDP1E9PL57 170 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 CAVIN2O95810 425 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 LATS1O95835 1130 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 TYRP14679 529 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 ZNF18P17022 549 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 SLC6A11P48066 632 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 MRPS21P82921 87 aaKnown RBP24.19■■□□□ 1.46
CBX3-204ENST00000456948 TRIP4Q15650 581 aaPredicted RBP24.19■■□□□ 1.46
CBX3-204ENST00000456948 HSF5Q4G112 596 aaPredicted RBP24.19■■□□□ 1.46
CBX3-204ENST00000456948 EFHC1Q5JVL4 640 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 NUGGCQ68CJ6 796 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 TSSK4Q6SA08 328 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 CAMKK1Q8N5S9 505 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 RPLP0P6Q8NHW5 317 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 KCNV2Q8TDN2 545 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 SFMBT1Q9UHJ3 866 aa24.19■■□□□ 1.46
CBX3-204ENST00000456948 AGO1Q9UL18 857 aaKnown RBP24.19■■□□□ 1.46
CBX3-204ENST00000456948 ZFHX2Q9C0A1 2572 aaPredicted RBP24.19■■□□□ 1.46
CBX3-204ENST00000456948 A0A0A0MRY4 1105 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 E5RJQ4 531 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 TULP3O75386 442 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 GLI1P08151 1106 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 CYP11B1P15538 503 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 HOXA6P31267 233 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 SLC11A2P49281 568 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 POLR2FP61218 127 aaKnown RBP24.18■■□□□ 1.46
CBX3-204ENST00000456948 YWHAZP63104 245 aaKnown RBP24.18■■□□□ 1.46
CBX3-204ENST00000456948 NCAPHQ15003 741 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 E2F5Q15329 346 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 SYCP1Q15431 976 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 GAB4Q2WGN9 574 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 GRAMD4Q6IC98 578 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 DPY19L2P1Q6NXN4 242 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 SYT13Q7L8C5 426 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 PASD1Q8IV76 773 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 CPXM2Q8N436 756 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 SERPINB11Q96P15 392 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 DDX50Q9BQ39 737 aaKnown RBP24.18■■□□□ 1.46
CBX3-204ENST00000456948 POPDC2Q9HBU9 364 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 DNAJC17Q9NVM6 304 aaKnown RBP24.18■■□□□ 1.46
CBX3-204ENST00000456948 AJAP1Q9UKB5 411 aaPredicted RBP24.18■■□□□ 1.46
CBX3-204ENST00000456948 ATG2BQ96BY7 2078 aa24.18■■□□□ 1.46
CBX3-204ENST00000456948 VPS13AQ96RL7 3174 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 F8VZ95 297 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 GABBR2O75899 941 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 LMNAP02545 664 aaKnown RBP24.17■■□□□ 1.46
CBX3-204ENST00000456948 KLKB1P03952 638 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 CNR2P34972 360 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 NAIF1Q69YI7 327 aaPredicted RBP24.17■■□□□ 1.46
CBX3-204ENST00000456948 TOGARAM2Q6ZUX3 1019 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 TRMT11Q7Z4G4 463 aaKnown RBP24.17■■□□□ 1.46
CBX3-204ENST00000456948 ZNF677Q86XU0 584 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 ZDHHC17Q8IUH5 632 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 ETFBKMTQ8IXQ9 262 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 ZBTB44Q8NCP5 570 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 CLEC4CQ8WTT0 213 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 NELL1Q92832 810 aa24.17■■□□□ 1.46
CBX3-204ENST00000456948 MYO15AQ9UKN7 3530 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 K7EQS6 105 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 PAPSS1O43252 624 aaPredicted RBP24.16■■□□□ 1.46
CBX3-204ENST00000456948 CACNG3O60359 315 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 STAT1P42224 750 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 TBX4P57082 545 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 KDSRQ06136 332 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 RING1Q06587 406 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 NNTQ13423 1086 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 C2orf27AQ580R0 203 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 LONP2Q86WA8 852 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 DDI1Q8WTU0 396 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 ERGIC2Q96RQ1 377 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 IRX2Q9BZI1 471 aaPredicted RBP24.16■■□□□ 1.46
CBX3-204ENST00000456948 ASNSD1Q9NWL6 643 aa24.16■■□□□ 1.46
CBX3-204ENST00000456948 SYCE3A1L190 88 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 LSM8O95777 96 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms