RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 NAGPAQ9UK23 515 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 COQ4Q9Y3A0 265 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 P4HA2O15460 535 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 MAP3K13O43283 966 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 KCNK5O95279 499 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 HMBSP08397 361 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 TYRP14679 529 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 P2RY2P41231 377 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 PTGER3P43115 390 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 IRX4P78413 519 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 CUL2Q13617 745 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 GRAMD4Q6IC98 578 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 PSAPL1Q6NUJ1 521 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 HTR3DQ70Z44 454 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 TMEM176AQ96HP8 235 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
TREX1-203ENST00000456089 BBS2Q9BXC9 721 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 SLC6A17Q9H1V8 727 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 FSCN3Q9NQT6 498 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 TMEM74BQ9NUR3 256 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
TREX1-203ENST00000456089 EPG5Q9HCE0 2579 aa13.59□□□□□ -0.23
TREX1-203ENST00000456089 PRRT4C9JH25 899 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
TREX1-203ENST00000456089 HOXB2P14652 356 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 GABRG2P18507 467 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 KIF11P52732 1056 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 KCNH2Q12809 1159 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 MAP7D1Q3KQU3 841 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 NDRG1Q92597 394 aaKnown RBP13.58□□□□□ -0.24
TREX1-203ENST00000456089 DUSP16Q9BY84 665 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 CD93Q9NPY3 652 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 LMBRD1Q9NUN5 540 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 RASAL2Q9UJF2 1139 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.24
TREX1-203ENST00000456089 RAD54BQ9Y620 910 aa13.58□□□□□ -0.24
TREX1-203ENST00000456089 WASH3PC4AMC7 463 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 TULP2O00295 520 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 KHNYNO15037 678 aaKnown RBP13.57□□□□□ -0.24
TREX1-203ENST00000456089 PMM2O15305 246 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 CACNG3O60359 315 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 STC2O76061 302 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 KLKB1P03952 638 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 CD19P15391 556 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 MTIF2P46199 727 aaKnown RBP13.57□□□□□ -0.24
TREX1-203ENST00000456089 RAD23BP54727 409 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 EFEMP1Q12805 493 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 HSF5Q4G112 596 aaPredicted RBP13.57□□□□□ -0.24
TREX1-203ENST00000456089 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 KIAA1211LQ6NV74 962 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 LPCAT2Q7L5N7 544 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 FAM114A1Q8IWE2 563 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 TRIM59Q8IWR1 403 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 PPM1KQ8N3J5 372 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 SLC4A11Q8NBS3 891 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 DDX1Q92499 740 aaKnown RBP13.57□□□□□ -0.24
TREX1-203ENST00000456089 SPACA7Q96KW9 195 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 CACNA2D2Q9NY47 1150 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 HESX1Q9UBX0 185 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 DNMT3LQ9UJW3 386 aa13.57□□□□□ -0.24
TREX1-203ENST00000456089 FRYQ5TBA9 3013 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 A0A1W2PQF6 199 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 CDX4O14627 284 aaPredicted RBP13.56□□□□□ -0.24
TREX1-203ENST00000456089 ITPKAP23677 461 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 PMLP29590 882 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 NTSR1P30989 418 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 MAPK8P45983 427 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 PLA2G4AP47712 749 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
TREX1-203ENST00000456089 MARSP56192 900 aaKnown RBP13.56□□□□□ -0.24
TREX1-203ENST00000456089 GOLGA8FQ08AF8 430 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 GOLGA8DPQ0D2H9 430 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 TRIM61Q5EBN2 209 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 Q6ZNB5 142 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 CCDC186Q7Z3E2 898 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 C11orf74Q86VG3 221 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 CHPFQ8IZ52 775 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 EHBP1Q8NDI1 1231 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 XPO6Q96QU8 1125 aaKnown RBP13.56□□□□□ -0.24
TREX1-203ENST00000456089 PNPLA8Q9NP80 782 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 TMEM9BQ9NQ34 198 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 KIAA1257Q9ULG3 409 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 CYP8B1Q9UNU6 501 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 PCDHB4Q9Y5E5 795 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 PCDH15Q96QU1 1955 aa13.56□□□□□ -0.24
TREX1-203ENST00000456089 CISD3P0C7P0 127 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 NDUFV2P19404 249 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 CORO1AP31146 461 aaKnown RBP13.55□□□□□ -0.24
TREX1-203ENST00000456089 DGKGP49619 791 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 RPL6Q02878 288 aaKnown RBP13.55□□□□□ -0.24
TREX1-203ENST00000456089 GOLGA7BQ2TAP0 167 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 SH3PXD2AQ5TCZ1 1133 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 TRMT11Q7Z4G4 463 aaKnown RBP13.55□□□□□ -0.24
TREX1-203ENST00000456089 TADA2BQ86TJ2 420 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 PIGZQ86VD9 579 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 IPO4Q8TEX9 1081 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms