RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 HOXC13P31276 330 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 ZNF165P49910 485 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 FOXK2Q01167 660 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 DMWDQ09019 674 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 PDCLQ13371 301 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 MSANTD2Q6P1R3 559 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 TMEM110Q86TL2 294 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 SLC47A2Q86VL8 602 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 EPC1Q9H2F5 836 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 SPHK2Q9NRA0 654 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 CYTH4Q9UIA0 394 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 ZNF510Q9Y2H8 683 aa18.14■□□□□ 0.49
USP39-208ENST00000455732 RALGAPA1Q6GYQ0 2036 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 DMXL1Q9Y485 3027 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 SYCE3A1L190 88 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 PIK3R2O00459 728 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 LTFP02788 710 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 ATP1A3P13637 1013 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 GAD2Q05329 585 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 LY6G5CQ5SRR4 150 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 BEND5Q7L4P6 421 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 CLEC4CQ8WTT0 213 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 RNF139Q8WU17 664 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 GOLGA1Q92805 767 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 PLD4Q96BZ4 506 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 ERGIC2Q96RQ1 377 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 DCLK3Q9C098 648 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 ST7Q9NRC1 585 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 MARK1Q9P0L2 795 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 HBS1LQ9Y450 684 aaKnown RBP18.13■□□□□ 0.49
USP39-208ENST00000455732 SDK1Q7Z5N4 2213 aa18.13■□□□□ 0.49
USP39-208ENST00000455732 E5RJQ4 531 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 PAPSS1O43252 624 aaPredicted RBP18.12■□□□□ 0.49
USP39-208ENST00000455732 ATG13O75143 517 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 KLKB1P03952 638 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 CYP11B1P15538 503 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 FNTBP49356 437 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 KLK7P49862 253 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 UBXN1Q04323 297 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 SYCP1Q15431 976 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 TRIP4Q15650 581 aaPredicted RBP18.12■□□□□ 0.49
USP39-208ENST00000455732 SKOR2Q2VWA4 1001 aaPredicted RBP18.12■□□□□ 0.49
USP39-208ENST00000455732 C12orf40Q86WS4 652 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 FMNL3Q8IVF7 1028 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 ETFBKMTQ8IXQ9 262 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 WDTC1Q8N5D0 677 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 EDEM1Q92611 657 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 NOX5Q96PH1 765 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 HINFPQ9BQA5 517 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 TRIM62Q9BVG3 475 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 MIS12Q9H081 205 aa18.12■□□□□ 0.49
USP39-208ENST00000455732 FAM207AQ9NSI2 230 aaPredicted RBP18.12■□□□□ 0.49
USP39-208ENST00000455732 SLC12A8A0AV02 714 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.11■□□□□ 0.49
USP39-208ENST00000455732 K7EQS6 105 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 EPHB6O15197 1021 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 CORO1AP31146 461 aaKnown RBP18.11■□□□□ 0.49
USP39-208ENST00000455732 KRT9P35527 623 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 SLC6A11P48066 632 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 JAM2P57087 298 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 MESP2Q0VG99 397 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 IQCB1Q15051 598 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 LONP2Q86WA8 852 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 TMEM25Q86YD3 366 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 SCUBE3Q8IX30 993 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 RPLP0P6Q8NHW5 317 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 CCDC26Q8TAB7 109 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 CEP83Q9Y592 693 aa18.11■□□□□ 0.49
USP39-208ENST00000455732 CEP250Q9BV73 2442 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 A0A0A0MRY4 1105 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 ANTXRLA6NF34 631 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 CAVIN2O95810 425 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 LATS1O95835 1130 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 FYNP06241 537 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 CHRM1P11229 460 aaPredicted RBP18.1■□□□□ 0.49
USP39-208ENST00000455732 CDH5P33151 784 aaPredicted RBP18.1■□□□□ 0.49
USP39-208ENST00000455732 ID4P47928 161 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 POLR2FP61218 127 aaKnown RBP18.1■□□□□ 0.49
USP39-208ENST00000455732 SYT13Q7L8C5 426 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 PASD1Q8IV76 773 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 FAM217AQ8IXS0 508 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 PHTF2Q8N3S3 785 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 C1orf131Q8NDD1 294 aaKnown RBP18.1■□□□□ 0.49
USP39-208ENST00000455732 EPS8L1Q8TE68 723 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 DDX1Q92499 740 aaKnown RBP18.1■□□□□ 0.49
USP39-208ENST00000455732 RUBCNQ92622 972 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 PPP1R13BQ96KQ4 1090 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 CPXM1Q96SM3 734 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 PNKPQ96T60 521 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 POLR3BQ9NW08 1133 aaPredicted RBP18.1■□□□□ 0.49
USP39-208ENST00000455732 WDR35Q9P2L0 1181 aa18.1■□□□□ 0.49
USP39-208ENST00000455732 AGO1Q9UL18 857 aaKnown RBP18.1■□□□□ 0.49
USP39-208ENST00000455732 SMG5Q9UPR3 1016 aaKnown RBP18.1■□□□□ 0.49
USP39-208ENST00000455732 HRO43593 1189 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 CACNG3O60359 315 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 IGLV3-27P01718 113 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 GLI1P08151 1106 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 HMBSP08397 361 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 CNR2P34972 360 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 CHKAP35790 457 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms