RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SLC2A14Q8TDB8 520 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 NUP58Q9BVL2 599 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 OSER1Q9NX31 292 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 THAP10Q9P2Z0 257 aaPredicted RBP24.48■■□□□ 1.51
PTPRA-208ENST00000455631 NUDT5Q9UKK9 219 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.48■■□□□ 1.51
PTPRA-208ENST00000455631 NPC1O15118 1278 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 EIF3DO15371 548 aaKnown RBP eCLIP24.47■■□□□ 1.51
PTPRA-208ENST00000455631 MFAP3P55082 362 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 CEBPZQ03701 1054 aaKnown RBP24.47■■□□□ 1.51
PTPRA-208ENST00000455631 ORC1Q13415 861 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 BIRC3Q13489 604 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 ZNF667Q5HYK9 610 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 Q6ZNB5 142 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 FAM124AQ86V42 546 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 PDILTQ8N807 584 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 PDCD7Q8N8D1 485 aaKnown RBP24.47■■□□□ 1.51
PTPRA-208ENST00000455631 XXYLT1Q8NBI6 393 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 PIP4K2CQ8TBX8 421 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 UCMAQ8WVF2 138 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 JAKMIP2Q96AA8 810 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 ELMO3Q96BJ8 720 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 P2RY11Q96G91 374 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 SDCBP2Q9H190 292 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 FBXO10Q9UK96 956 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 SLC27A6Q9Y2P4 619 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 CKAP5Q14008 2032 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 BPTFQ12830 3046 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 SHROOM3Q8TF72 1996 aa24.47■■□□□ 1.51
PTPRA-208ENST00000455631 ASXL3Q9C0F0 2248 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 TGFB1I1O43294 461 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 TNFSF14O43557 240 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 IGLV3-19P01714 112 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 AFF3P51826 1226 aaKnown RBP24.46■■□□□ 1.51
PTPRA-208ENST00000455631 KIF19Q2TAC6 998 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 GPRIN1Q7Z2K8 1008 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 C1orf216Q8TAB5 229 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 GZF1Q9H116 711 aaPredicted RBP24.46■■□□□ 1.51
PTPRA-208ENST00000455631 CSNK1G1Q9HCP0 422 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 FAM49BQ9NUQ9 324 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 PPP4R2Q9NY27 417 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 DNMT3LQ9UJW3 386 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 SNX11Q9Y5W9 270 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 SLCO1B1Q9Y6L6 691 aa24.46■■□□□ 1.51
PTPRA-208ENST00000455631 ACO1P21399 889 aaKnown RBP24.45■■□□□ 1.5
PTPRA-208ENST00000455631 PLA2G4AP47712 749 aa24.45■■□□□ 1.5
PTPRA-208ENST00000455631 COPAP53621 1224 aa24.45■■□□□ 1.5
PTPRA-208ENST00000455631 ENPP2Q13822 863 aa24.45■■□□□ 1.5
PTPRA-208ENST00000455631 C10orf120Q5SQS8 335 aa24.45■■□□□ 1.5
PTPRA-208ENST00000455631 NELFCDQ8IXH7 590 aa24.45■■□□□ 1.5
PTPRA-208ENST00000455631 VRTNQ9H8Y1 702 aa24.45■■□□□ 1.5
PTPRA-208ENST00000455631 SCML2Q9UQR0 700 aa24.45■■□□□ 1.5
PTPRA-208ENST00000455631 STC2O76061 302 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 PENKP01210 267 aaPredicted RBP24.44■■□□□ 1.5
PTPRA-208ENST00000455631 RARGP13631 454 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 PRKCHP24723 683 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 GRK6P43250 576 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 CASP4P49662 377 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 ZNF234Q14588 700 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 TEAD4Q15561 434 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 SMAD1Q15797 465 aaKnown RBP24.44■■□□□ 1.5
PTPRA-208ENST00000455631 DHRS13Q6UX07 377 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 EPM2AIP1Q7L775 607 aaPredicted RBP24.44■■□□□ 1.5
PTPRA-208ENST00000455631 ANKS1BQ7Z6G8 1248 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 ENGASEQ8NFI3 743 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 ZNF507Q8TCN5 953 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 TNMDQ9H2S6 317 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 NMUR1Q9HB89 426 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 HMGXB4Q9UGU5 601 aa24.44■■□□□ 1.5
PTPRA-208ENST00000455631 A0A1W2PQH9 124 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 EPHX1P07099 455 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 FAM200BP0CF97 657 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 ADORA2BP29275 332 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 CCT8P50990 548 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 ASIC1P78348 528 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 NCOA4Q13772 614 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 PTPRNQ16849 979 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 FYB2Q5VWT5 728 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 FAM173BQ6P4H8 233 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 KLHDC10Q6PID8 442 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 CIPCQ9C0C6 399 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 PCED1AQ9H1Q7 454 aa24.43■■□□□ 1.5
PTPRA-208ENST00000455631 C6orf106Q9H6K1 298 aaPredicted RBP24.43■■□□□ 1.5
PTPRA-208ENST00000455631 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.43■■□□□ 1.5
PTPRA-208ENST00000455631 HLA-EP13747 358 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 FAM26FQ5R3K3 315 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 LAYNQ6UX15 382 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 SERPINA13PQ6UXR4 307 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 C12orf29Q8N999 325 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 SORCS1Q8WY21 1168 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 SLC39A7Q92504 469 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 LRRC27Q9C0I9 530 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 NAGPAQ9UK23 515 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 ANKRD6Q9Y2G4 727 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 CABIN1Q9Y6J0 2220 aa24.42■■□□□ 1.5
PTPRA-208ENST00000455631 HELZ2Q9BYK8 2649 aaKnown RBP24.42■■□□□ 1.5
PTPRA-208ENST00000455631 NUMA1Q14980 2115 aa24.41■■□□□ 1.5
PTPRA-208ENST00000455631 UBE4BO95155 1302 aa24.41■■□□□ 1.5
PTPRA-208ENST00000455631 KCNK3O14649 394 aa24.41■■□□□ 1.5
PTPRA-208ENST00000455631 CHKAP35790 457 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms