RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 LATS1O95835 1130 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TRUB2O95900 331 aaKnown RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 PDGFRAP16234 1089 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SP100P23497 879 aaPredicted RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SDC4P31431 198 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 VIPR2P41587 438 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 PTPN9P43378 593 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 GALCP54803 685 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 RNASE9P60153 205 aaKnown RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 KRT83P78385 493 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 EIF4EBP2Q13542 120 aaPredicted RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 MTF1Q14872 753 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TCEAL1Q15170 157 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 PDGFRLQ15198 375 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 ARHGAP29Q52LW3 1261 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 NUGGCQ68CJ6 796 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 CC2D1AQ6P1N0 951 aaPredicted RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 HTR3DQ70Z44 454 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TAC4Q86UU9 113 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 MIB1Q86YT6 1006 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 LRRC8AQ8IWT6 810 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 UNC45BQ8IWX7 931 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC44A3Q8N4M1 653 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 ADAMTS19Q8TE59 1207 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 AZIN2Q96A70 460 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 NCAPGQ9BPX3 1015 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TRMT61BQ9BVS5 477 aaKnown RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 THAP2Q9H0W7 228 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SMG9Q9H0W8 520 aaKnown RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TRPV5Q9NQA5 729 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 METTL5Q9NRN9 209 aaKnown RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SPTLC3Q9NUV7 552 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SMPD4Q9NXE4 827 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 CFAP97Q9P2B7 532 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 LSM7Q9UK45 103 aaKnown RBP14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 NUDT5Q9UKK9 219 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 CCL26Q9Y258 94 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 SH3BP1Q9Y3L3 701 aa14.92□□□□□ -0.02
HMGXB4-204ENST00000455359 TMEM191CA6NGB0 347 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 SOWAHDA6NJG2 315 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 CHADO15335 359 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 ARHGAP6O43182 974 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 IRAK2O43187 625 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 ENDOD1O94919 500 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC34A2O95436 690 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 IGLV3-27P01718 113 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 ABCB4P21439 1286 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 RFC1P35251 1148 aaPredicted RBP14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 FLT3P36888 993 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 MAGEA1P43355 309 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 HARS2P49590 506 aaKnown RBP14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 ZNF143P52747 638 aaPredicted RBP14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 TBX4P57082 545 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 ZXDBP98169 803 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 TDGQ13569 410 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 PPP2R5DQ14738 602 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 ACBD5Q5T8D3 534 aaPredicted RBP14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 VITQ6UXI7 678 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 SND1Q7KZF4 910 aaKnown RBP eCLIP14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 STRADAQ7RTN6 431 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 BNIPLQ7Z465 357 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 YAF2Q8IY57 180 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 RXFP2Q8WXD0 754 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 RSPRY1Q96DX4 576 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC39A13Q96H72 371 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 CALR3Q96L12 384 aaKnown RBP14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 CNPY3Q9BT09 278 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 IRX2Q9BZI1 471 aaPredicted RBP14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 FAM204AQ9H8W3 233 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 GKN1Q9NS71 199 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 DDIT4Q9NX09 232 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 SFMBT1Q9UHJ3 866 aa14.91□□□□□ -0.02
HMGXB4-204ENST00000455359 C2orf16Q68DN1 1984 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 ZNF263O14978 683 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 MDM4O15151 490 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 GREM1O60565 184 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 STC2O76061 302 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 GPD1P21695 349 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 CCR1P32246 355 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 PFKPQ01813 784 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 ACAP1Q15027 740 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 BRMS1LQ5PSV4 323 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 RHOT2Q8IXI1 618 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 OSCP1Q8WVF1 389 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 CENPIQ92674 756 aaPredicted RBP14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 IRF7Q92985 503 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 LRRC3BQ96PB8 259 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 MCEEQ96PE7 176 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 KXD1Q9BQD3 176 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 FAM83CQ9BQN1 747 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC2A4RGQ9NR83 387 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 SLC12A6Q9UHW9 1150 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 STOML2Q9UJZ1 356 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 SORCS3Q9UPU3 1222 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 PCDHA13Q9Y5I0 950 aa14.9□□□□□ -0.02
HMGXB4-204ENST00000455359 GREB1Q4ZG55 1949 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 DENND4AQ7Z401 1863 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 M0QYT0 321 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms