RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ZNF397Q8NF99 534 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-205ENST00000454542 DQX1Q8TE96 717 aaKnown RBP14.81□□□□□ -0.04
HDAC4-205ENST00000454542 SLC2A13Q96QE2 648 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 TRIM62Q9BVG3 475 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 DCLK3Q9C098 648 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 STOML2Q9UJZ1 356 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 NDRG2Q9UN36 371 aaKnown RBP14.81□□□□□ -0.04
HDAC4-205ENST00000454542 ZNF510Q9Y2H8 683 aa14.81□□□□□ -0.04
HDAC4-205ENST00000454542 SLC12A8A0AV02 714 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 GOLGA6L19H0YKK7 550 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 STK25O00506 426 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 LATS1O95835 1130 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 ADH5P11766 374 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 CORO1AP31146 461 aaKnown RBP14.8□□□□□ -0.04
HDAC4-205ENST00000454542 SCNN1AP37088 669 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 RING1Q06587 406 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 EIF4EBP2Q13542 120 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-205ENST00000454542 GAS6Q14393 721 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 DGKKQ5KSL6 1271 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 LY6G5CQ5SRR4 150 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 TAF3Q5VWG9 929 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 FAM183BPQ6ZVS7 135 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 SLC26A9Q7LBE3 791 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 C12orf40Q86WS4 652 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 PHTF2Q8N3S3 785 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 SYNPOQ8N3V7 929 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 IPO4Q8TEX9 1081 aaKnown RBP14.8□□□□□ -0.04
HDAC4-205ENST00000454542 RNF139Q8WU17 664 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 EZH1Q92800 747 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-205ENST00000454542 CD101Q93033 1021 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 P2RY11Q96G91 374 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 PCMTD1Q96MG8 357 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-205ENST00000454542 SYT11Q9BT88 431 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 TSPY26PQ9H489 355 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 POPDC2Q9HBU9 364 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 PRMT8Q9NR22 394 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-205ENST00000454542 SPHK2Q9NRA0 654 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 SFMBT1Q9UHJ3 866 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 MYOFQ9NZM1 2061 aa14.8□□□□□ -0.04
HDAC4-205ENST00000454542 MSI1O43347 362 aaKnown RBP14.79□□□□□ -0.04
HDAC4-205ENST00000454542 HSF2BPO75031 334 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 DAB1O75553 588 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 SERPINC1P01008 464 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 DRD1P21728 446 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 PTPN5P54829 565 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 GSCP56915 257 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-205ENST00000454542 TRIM72Q6ZMU5 477 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 TOGARAM2Q6ZUX3 1019 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 TAC4Q86UU9 113 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 ZDHHC17Q8IUH5 632 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 FANCMQ8IYD8 2048 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 MAML2Q8IZL2 1156 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-205ENST00000454542 CPXM2Q8N436 756 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 GOLGA1Q92805 767 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 FAM149B1Q96BN6 582 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 SLC39A13Q96H72 371 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 SERPINB11Q96P15 392 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 P2RY13Q9BPV8 354 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 EDEM3Q9BZQ6 932 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 FBRSL1Q9HCM7 1045 aaKnown RBP14.79□□□□□ -0.04
HDAC4-205ENST00000454542 AGO1Q9UL18 857 aaKnown RBP14.79□□□□□ -0.04
HDAC4-205ENST00000454542 NAALADL1Q9UQQ1 740 aa14.79□□□□□ -0.04
HDAC4-205ENST00000454542 CACNA1HO95180 2353 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 IRAK2O43187 625 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 CACNG3O60359 315 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 PAPSS2O95340 614 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-205ENST00000454542 EGFP01133 1207 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 PENKP01210 267 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-205ENST00000454542 UNGP13051 313 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-205ENST00000454542 NCAM1P13591 858 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 FERP16591 822 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 SNX16P57768 344 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 YWHAZP63104 245 aaKnown RBP14.78□□□□□ -0.04
HDAC4-205ENST00000454542 CENPCQ03188 943 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 GAD2Q05329 585 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 TAF5Q15542 800 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 OTUD1Q5VV17 481 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-205ENST00000454542 SYPL2Q5VXT5 272 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 E4F1Q66K89 784 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-205ENST00000454542 RNF43Q68DV7 783 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 Q6ZS52 159 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 CACNA2D4Q7Z3S7 1137 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 XYLT1Q86Y38 959 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 TMEM25Q86YD3 366 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 C1orf210Q8IVY1 113 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 EXOC4Q96A65 974 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 FCRL2Q96LA5 508 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-205ENST00000454542 PCDHB18PQ96TA0 734 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 LMAN1LQ9HAT1 526 aa14.78□□□□□ -0.04
HDAC4-205ENST00000454542 RBM12Q9NTZ6 932 aaKnown RBP14.78□□□□□ -0.04
HDAC4-205ENST00000454542 DMDP11532 3685 aa14.77□□□□□ -0.04
HDAC4-205ENST00000454542 ITIH6Q6UXX5 1313 aa14.77□□□□□ -0.04
HDAC4-205ENST00000454542 A0A1W2PQJ5 194 aa14.77□□□□□ -0.05
HDAC4-205ENST00000454542 LRRC53A6NM62 1247 aa14.77□□□□□ -0.05
HDAC4-205ENST00000454542 HMBSP08397 361 aa14.77□□□□□ -0.05
HDAC4-205ENST00000454542 TDGF1P13385 188 aa14.77□□□□□ -0.05
HDAC4-205ENST00000454542 MMP8P22894 467 aa14.77□□□□□ -0.05
HDAC4-205ENST00000454542 PRKCIP41743 596 aa14.77□□□□□ -0.05
HDAC4-205ENST00000454542 GALK1P51570 392 aa14.77□□□□□ -0.05
HDAC4-205ENST00000454542 UBASH3AP57075 661 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms