RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 ACP6Q9NPH0 428 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 PIH1D1Q9NWS0 290 aaKnown RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 SLC24A2Q9UI40 661 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 DRG1Q9Y295 367 aaKnown RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 PCDHAC2Q9Y5I4 1007 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 DCCP43146 1447 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 C16orf96A6NNT2 1141 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 PLSCR1O15162 318 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 AKR1A1P14550 325 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 SSTR1P30872 391 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 AQP5P55064 265 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 ACVR2BQ13705 512 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 CSHL1Q14406 222 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 HIST2H2ACQ16777 129 aaPredicted RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 FAM171A1Q5VUB5 890 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 HIST2H2AA3Q6FI13 130 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 PTAR1Q7Z6K3 402 aaPredicted RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 NT5DC3Q86UY8 548 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 TMEM139Q8IV31 216 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 DEFB106AQ8N104 65 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.78□□□□□ -1.32
HCG18-239ENST00000454129 C3orf20Q8ND61 904 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 UCMAQ8WVF2 138 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 CCDC126Q96EE4 140 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 GAD1Q99259 594 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 DCLK3Q9C098 648 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 ANKZF1Q9H8Y5 726 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 EFCAB1Q9HAE3 211 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 SLC40A1Q9NP59 571 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 SHOC2Q9UQ13 582 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 ATP11BQ9Y2G3 1177 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 DNAJC16Q9Y2G8 782 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 PCDHA3Q9Y5H8 950 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 COL5A2P05997 1499 aaPredicted RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 PIK3CDO00329 1044 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 MT-CO1P00395 513 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 SERPINF2P08697 491 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 ITGALP20701 1170 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 UBA1P22314 1058 aaKnown RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 MIPP30301 263 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 HNRNPH1P31943 449 aaKnown RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 SERPINB5P36952 375 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 VGLL4Q14135 290 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 MFSD10Q14728 455 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 MAGEB18Q96M61 343 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 PURBQ96QR8 312 aaKnown RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 RBBP8Q99708 897 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 MRIQ9BWK5 157 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 HPS4Q9NQG7 708 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 XPNPEP3Q9NQH7 507 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 NCKIPSDQ9NZQ3 722 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 KANSL3Q9P2N6 904 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 SLC25A13Q9UJS0 675 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 CDV3Q9UKY7 258 aaKnown RBP6.78□□□□□ -1.32
HCG18-239ENST00000454129 VANGL2Q9ULK5 521 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 PCDHB5Q9Y5E4 795 aa6.78□□□□□ -1.32
HCG18-239ENST00000454129 MANSC4A6NHS7 340 aaPredicted RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 F8VP50 259 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 IRF6O14896 467 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 PQBP1O60828 265 aaKnown RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 PSMD10O75832 226 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 RECQL4O94761 1208 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 MICAL2O94851 1124 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 ARIH2O95376 493 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 CRTAMO95727 393 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 HSPA1AP0DMV8 641 aaKnown RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 HSPA1BP0DMV9 641 aaKnown RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 THRAP10827 490 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 PECAM1P16284 738 aaPredicted RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 SOAT1P35610 550 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 RENBPP51606 427 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 EPHB3P54753 998 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 NME5P56597 212 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 SWT1Q5T5J6 900 aaKnown RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 SEL1L3Q68CR1 1132 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 LRRC8BQ6P9F7 803 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 COPS5Q92905 334 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 ZNF333Q96JL9 665 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 UNKQ9C0B0 810 aaKnown RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 PORCNQ9H237 461 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 ATXN3LQ9H3M9 355 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 SYTL2Q9HCH5 934 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 KCNMB3Q9NPA1 279 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 SCUBE2Q9NQ36 999 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 PDGFCQ9NRA1 345 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 BLOC1S6Q9UL45 172 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 DNPEPQ9ULA0 475 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 TBKBP1A7MCY6 615 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 ERI2A8K979 691 aaKnown RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 E5RJQ4 531 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 PLA2G6O60733 806 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 RAMP2O60895 175 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 GLP2RO95838 553 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 LGALS2P05162 132 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 BMP6P22004 513 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 EIF4BP23588 611 aaKnown RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 RPL21P46778 160 aaKnown RBP6.77□□□□□ -1.33
HCG18-239ENST00000454129 PRIM2P49643 509 aa6.77□□□□□ -1.33
HCG18-239ENST00000454129 PSEN2P49810 448 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms