RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 RAB11FIP4Q86YS3 637 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 Q8N1X5 172 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 LRRC71Q8N4P6 559 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 ZNF276Q8N554 614 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 ESX1Q8N693 406 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLC16A11Q8NCK7 471 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 SUPT20HQ8NEM7 779 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 CSGALNACT1Q8TDX6 532 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 SSH3Q8TE77 659 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 AFG1LQ8WV93 481 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 OVCA2Q8WZ82 227 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 DVL3Q92997 716 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 CTHRC1Q96CG8 243 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 WDYHV1Q96HA8 205 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 TWNKQ96RR1 684 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 SCAND2PQ9GZW5 306 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 ABHD16BQ9H3Z7 469 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 ELAC1Q9H777 363 aaKnown RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 KCNK9Q9NPC2 374 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 VPS45Q9NRW7 570 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 PARPBPQ9NWS1 579 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 NDUFAF4Q9P032 175 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 IFT80Q9P2H3 777 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 PI4KBQ9UBF8 816 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 NKX1-2Q9UD57 310 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 GABRQQ9UN88 632 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 FZD1Q9UP38 647 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 SH2B3Q9UQQ2 575 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 TTLL3Q9Y4R7 772 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 LOC105369274A0A096LPK9 316 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 LOC102723532A0A0G2JNH3 316 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 FAM90A20PA6NIJ5 464 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 KIAA0355O15063 1070 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 PPP6R2O75170 966 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 LARGE1O95461 756 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 VNN1O95497 513 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 PEX11BO96011 259 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 TFRCP02786 760 aaKnown RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 PDHA1P08559 390 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 CNPP09543 421 aaKnown RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 EGR2P11161 476 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 TNFAIP3P21580 790 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 AKT1P31749 480 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 PBX1P40424 430 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 MTHFSP49914 203 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 EIF4A1P60842 406 aaKnown RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 MPP1Q00013 466 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 NUCB1Q02818 461 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 UBE3AQ05086 875 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 CHRNDQ07001 517 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 G3BP1Q13283 466 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 SF3B3Q15393 1217 aaKnown RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 ST3GAL2Q16842 350 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 ALDH1L2Q3SY69 923 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 GALNTL6Q49A17 601 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 TMEM196Q5HYL7 178 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 WDR45BQ5MNZ6 344 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 ZKSCAN2Q63HK3 967 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 KIAA0895LQ68EN5 471 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 RRAGAQ7L523 313 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 CAND1Q86VP6 1230 aaKnown RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 ARHGEF19Q8IW93 802 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 OR4N4Q8N0Y3 316 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 FSTL5Q8N475 847 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 C11orf44Q8N8P7 122 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 B3GALNT2Q8NCR0 500 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 CHST13Q8NET6 341 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 MYCBPAPQ8TBZ2 947 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 SH3RF3Q8TEJ3 882 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLC25A43Q8WUT9 341 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 CPT1BQ92523 772 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 GLG1Q92896 1179 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 C3orf49Q96BT1 292 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 MCRS1Q96EZ8 462 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 SEC62Q99442 399 aaKnown RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 GLOD4Q9HC38 313 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 UBN1Q9NPG3 1134 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 ZBTB1Q9Y2K1 713 aa4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 RSF1Q96T23 1441 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P15-201ENST00000453854 ADGRA2Q96PE1 1338 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 KDM6BO15054 1643 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 A0A1W2PRQ8 180 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLC38A8A6NNN8 435 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 PRSS47A8MTI9 375 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 VWC2LB2RUY7 222 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 KIF28PB7ZC32 967 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 E7EVH7 732 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 MUSKO15146 869 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 SPRY2O43597 315 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 ONECUT2O95948 504 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 FSHBP01225 129 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 CYP21A2P08686 494 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 IL6RP08887 468 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 TMEM225BP0DP42 221 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 SERPINA4P29622 427 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 LIPAP38571 399 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 TUBP50607 506 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 DGKQP52824 942 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 GUCY1B3Q02153 619 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms