RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 A0A1B0GTW7 788 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 hCG_1984214I3L0E3 225 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 AREL1O15033 823 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 IRAK2O43187 625 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 RAMP2O60895 175 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 HLA-DOAP06340 250 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 GNAI3P08754 354 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 CKBP12277 381 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 GABRB3P28472 473 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 ZEB1P37275 1124 aaPredicted RBP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 CASP2P42575 452 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 C1QTNF8P60827 252 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 GNAI1P63096 354 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 GUCY1B3Q02153 619 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 FSTL1Q12841 308 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 TP53BP2Q13625 1128 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 RAB32Q13637 225 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 EIF4A2Q14240 407 aaKnown RBP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 HABP2Q14520 560 aaPredicted RBP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 AMOTQ4VCS5 1084 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 SLC44A4Q53GD3 710 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 PLEKHO1Q53GL0 409 aaPredicted RBP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 C1orf141Q5JVX7 400 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 HYIQ5T013 277 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 L1TD1Q5T7N2 865 aaKnown RBP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 INTS11Q5TA45 600 aaKnown RBP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 LMBRD2Q68DH5 695 aaPredicted RBP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 LIN54Q6MZP7 749 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 RETSATQ6NUM9 610 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 FAM180BQ6P0A1 224 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 MOGAT3Q86VF5 341 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 TMEM132CQ8N3T6 1108 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 FITM2Q8N6M3 262 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 CYP2W1Q8TAV3 490 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 UBE2Q2Q8WVN8 375 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 ASB12Q8WXK4 309 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 USP13Q92995 863 aaPredicted RBP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.96□□□□□ -1.62
LINC00393-202ENST00000452852 PANK3Q9H999 370 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 MID2Q9UJV3 735 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 GJD2Q9UKL4 321 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 ZDHHC8Q9ULC8 765 aa4.96□□□□□ -1.62
LINC00393-202ENST00000452852 A0A087WZ62 844 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 CDHR4A6H8M9 788 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 ERVV-2B6SEH9 535 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 RNASEH2AO75792 299 aaKnown RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 RASSF9O75901 435 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 DNAJB5O75953 348 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 SPDEFO95238 335 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 MBD4O95243 580 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 CD4P01730 458 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 TXNP10599 105 aaKnown RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 HSPA5P11021 654 aaKnown RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 MTHFD1P11586 935 aaKnown RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 ALAS1P13196 640 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 FGFR4P22455 802 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 SLC6A4P31645 630 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 MTHFSP49914 203 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 TUBP50607 506 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 UCP3P55916 312 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 HSD11B2P80365 405 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 OCA2Q04671 838 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 FOXO1Q12778 655 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 KIF22Q14807 665 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 ATP2B3Q16720 1220 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 NOMO2Q5JPE7 1267 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 B3GNTL1Q67FW5 361 aaPredicted RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 ZNF530Q6P9A1 599 aaPredicted RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 PCSK4Q6UW60 755 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 ZDHHC24Q6UX98 284 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 KRBA2Q6ZNG9 492 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 C1orf122Q6ZSJ8 110 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 SDR16C5Q8N3Y7 309 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 VGLL2Q8N8G2 317 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 CCDC150Q8NCX0 1101 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 IL17RDQ8NFM7 739 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 TBC1D15Q8TC07 691 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 FAM71BQ8TC56 605 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 STT3BQ8TCJ2 826 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 RUBCNQ92622 972 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 MARS2Q96GW9 593 aaKnown RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 SEC62Q99442 399 aaKnown RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 SLC26A6Q9BXS9 759 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 PACSIN1Q9BY11 444 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 MAGEB5Q9BZ81 275 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 RNPEPQ9H4A4 650 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 A1CFQ9NQ94 594 aaKnown RBP4.95□□□□□ -1.62
LINC00393-202ENST00000452852 RGL1Q9NZL6 768 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 HDAC9Q9UKV0 1011 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 ASAP1Q9ULH1 1129 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 AGAP1Q9UPQ3 857 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 KNSTRNQ9Y448 316 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 DMRT1Q9Y5R6 373 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 CEP350Q5VT06 3117 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 IGSF1Q8N6C5 1336 aa4.95□□□□□ -1.62
LINC00393-202ENST00000452852 BRCA1P38398 1863 aaKnown RBP4.94□□□□□ -1.62
LINC00393-202ENST00000452852 CICQ96RK0 1608 aaPredicted RBP4.94□□□□□ -1.62
LINC00393-202ENST00000452852 A0A087WWL8 130 aa4.94□□□□□ -1.62
LINC00393-202ENST00000452852 GRID2IPA4D2P6 1211 aa4.94□□□□□ -1.62
LINC00393-202ENST00000452852 CLCA1A8K7I4 914 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms