RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 HNRNPLP14866 589 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHD3-206ENST00000452447 DGKGP49619 791 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 STX17P56962 302 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 ADIGQ0VDE8 80 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 PAK1Q13153 545 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 PM20D1Q6GTS8 502 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 SDE2Q6IQ49 451 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 SIX6OS1Q8N1H7 587 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 UBA3Q8TBC4 463 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 RNF139Q8WU17 664 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 HMGB4Q8WW32 186 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 VPS45Q9NRW7 570 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 OLA1Q9NTK5 396 aaKnown RBP13.51□□□□□ -0.25
CHD3-206ENST00000452447 PLK2Q9NYY3 685 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 STARD13Q9Y3M8 1113 aa13.51□□□□□ -0.25
CHD3-206ENST00000452447 TCRBV21S2A2A0A5A6 115 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 SLC12A8A0AV02 714 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 TULP2O00295 520 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 O00370 1275 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 MAP3K13O43283 966 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 FGFR1OPO95684 399 aaKnown RBP13.5□□□□□ -0.25
CHD3-206ENST00000452447 KLKB1P03952 638 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 SETSIPP0DME0 302 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 CHRM1P11229 460 aaPredicted RBP13.5□□□□□ -0.25
CHD3-206ENST00000452447 HOXB2P14652 356 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 NTSR1P30989 418 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 CORO1AP31146 461 aaKnown RBP13.5□□□□□ -0.25
CHD3-206ENST00000452447 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 BYSLQ13895 437 aaKnown RBP13.5□□□□□ -0.25
CHD3-206ENST00000452447 PLA2G2CQ5R387 149 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 IL31Q6EBC2 164 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 CHPFQ8IZ52 775 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 UBR7Q8N806 425 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 SRRTQ9BXP5 876 aaKnown RBP13.5□□□□□ -0.25
CHD3-206ENST00000452447 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHD3-206ENST00000452447 CEP192Q8TEP8 1941 aa13.5□□□□□ -0.25
CHD3-206ENST00000452447 CAVIN2O95810 425 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 AFPP02771 609 aaKnown RBP13.49□□□□□ -0.25
CHD3-206ENST00000452447 CYBBP04839 570 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 WASP42768 502 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 UBE2HP62256 183 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 STILQ15468 1287 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 EGFLAMQ63HQ2 1017 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 PMS2CLQ68D20 193 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 TOGARAM2Q6ZUX3 1019 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 RRAGAQ7L523 313 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 DENND1CQ8IV53 801 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 TRIML1Q8N9V2 468 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 OLIG1Q8TAK6 271 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 RLN3Q8WXF3 142 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 KCTD13Q8WZ19 329 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 NDRG1Q92597 394 aaKnown RBP13.49□□□□□ -0.25
CHD3-206ENST00000452447 PLD4Q96BZ4 506 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 SMOC1Q9H4F8 434 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 AGO1Q9UL18 857 aaKnown RBP13.49□□□□□ -0.25
CHD3-206ENST00000452447 BCLAF3A2AJT9 711 aaKnown RBP13.49□□□□□ -0.25
CHD3-206ENST00000452447 PRRT4C9JH25 899 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 LCP1P13796 627 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 BCKDHBP21953 392 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 P2RY2P41231 377 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 DHPSP49366 369 aaPredicted RBP13.49□□□□□ -0.25
CHD3-206ENST00000452447 HARS2P49590 506 aaKnown RBP13.49□□□□□ -0.25
CHD3-206ENST00000452447 MARSP56192 900 aaKnown RBP13.49□□□□□ -0.25
CHD3-206ENST00000452447 GCNT1Q02742 428 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 CNGA2Q16280 664 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 CAMK4Q16566 473 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 BSPRYQ5W0U4 402 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 LPCAT2Q7L5N7 544 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 CREBRFQ8IUR6 639 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 TRIM59Q8IWR1 403 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 EHBP1Q8NDI1 1231 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 LMO3Q8TAP4 145 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 TFAP2BQ92481 460 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 DDX1Q92499 740 aaKnown RBP13.49□□□□□ -0.25
CHD3-206ENST00000452447 KAT5Q92993 513 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 CNGB3Q9NQW8 809 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 ABCC13Q9NSE7 274 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
CHD3-206ENST00000452447 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 YJEFN3A6XGL0 299 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 E7ENQ6 273 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 M0QYV0 167 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 RNF225M0QZC1 329 aaPredicted RBP13.48□□□□□ -0.25
CHD3-206ENST00000452447 PENKP01210 267 aaPredicted RBP13.48□□□□□ -0.25
CHD3-206ENST00000452447 CISD3P0C7P0 127 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 BRD2P25440 801 aaKnown RBP13.48□□□□□ -0.25
CHD3-206ENST00000452447 RGS7P49802 495 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 LIMK1P53667 647 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 PKDCCQ504Y2 493 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 FYB2Q5VWT5 728 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 CYP2U1Q7Z449 544 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 FMNL3Q8IVF7 1028 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 RBBP8NLQ8NC74 664 aaPredicted RBP13.48□□□□□ -0.25
CHD3-206ENST00000452447 SLC35F5Q8WV83 523 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 EDEM1Q92611 657 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 RXFP3Q9NSD7 469 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 SFMBT1Q9UHJ3 866 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 FBXO10Q9UK96 956 aa13.48□□□□□ -0.25
CHD3-206ENST00000452447 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms