RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RTKNQ9BST9 563 aa13.08□□□□□ -0.32
CPSF4-208ENST00000452047 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
CPSF4-208ENST00000452047 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.08□□□□□ -0.32
CPSF4-208ENST00000452047 INVSQ9Y283 1065 aa13.08□□□□□ -0.32
CPSF4-208ENST00000452047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-208ENST00000452047 PRRT4C9JH25 899 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 SLC30A4O14863 429 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 GABBR2O75899 941 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 ALDH1A2O94788 518 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 GNA14O95837 355 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 PENKP01210 267 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-208ENST00000452047 HMBSP08397 361 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 CISD3P0C7P0 127 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 BCKDHBP21953 392 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 CORO1AP31146 461 aaKnown RBP13.07□□□□□ -0.32
CPSF4-208ENST00000452047 CETN1Q12798 172 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 KCNH2Q12809 1159 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 FYB2Q5VWT5 728 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 EGFLAMQ63HQ2 1017 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 PMS2CLQ68D20 193 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 RSRC2Q7L4I2 434 aaKnown RBP13.07□□□□□ -0.32
CPSF4-208ENST00000452047 TRMT11Q7Z4G4 463 aaKnown RBP13.07□□□□□ -0.32
CPSF4-208ENST00000452047 FAM217AQ8IXS0 508 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 SCML4Q8N228 414 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 SLC35F5Q8WV83 523 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 BHMTQ93088 406 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 MED15Q96RN5 788 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 SRRTQ9BXP5 876 aaKnown RBP13.07□□□□□ -0.32
CPSF4-208ENST00000452047 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 LRRC4Q9HBW1 653 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 CD248Q9HCU0 757 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 POLMQ9NP87 494 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-208ENST00000452047 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 FBXO10Q9UK96 956 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 AGO1Q9UL18 857 aaKnown RBP13.07□□□□□ -0.32
CPSF4-208ENST00000452047 STRIP2Q9ULQ0 834 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 ZNF510Q9Y2H8 683 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 PCDHB4Q9Y5E5 795 aa13.07□□□□□ -0.32
CPSF4-208ENST00000452047 A0A1W2PQF6 199 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 TCRBV21S2A2A0A5A6 115 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 SLC12A8A0AV02 714 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 YJEFN3A6XGL0 299 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 E7ENQ6 273 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 RHOBTB1O94844 696 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 CALCAP01258 141 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 AFPP02771 609 aaKnown RBP13.06□□□□□ -0.32
CPSF4-208ENST00000452047 BRD2P25440 801 aaKnown RBP13.06□□□□□ -0.32
CPSF4-208ENST00000452047 CHKAP35790 457 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 P2RY2P41231 377 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 DGKGP49619 791 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 DAOAP59103 153 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 TRIP4Q15650 581 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-208ENST00000452047 CNGA2Q16280 664 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 RRAGAQ7L523 313 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 C11orf74Q86VG3 221 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 SIX6OS1Q8N1H7 587 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 CPXM2Q8N436 756 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 RBBP8NLQ8NC74 664 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-208ENST00000452047 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 PLD4Q96BZ4 506 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 KREMEN1Q96MU8 473 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
CPSF4-208ENST00000452047 ACOX2Q99424 681 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 SMOC1Q9H4F8 434 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 OLA1Q9NTK5 396 aaKnown RBP13.06□□□□□ -0.32
CPSF4-208ENST00000452047 PLK2Q9NYY3 685 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 CNTN6Q9UQ52 1028 aa13.06□□□□□ -0.32
CPSF4-208ENST00000452047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPSF4-208ENST00000452047 BCLAF3A2AJT9 711 aaKnown RBP13.05□□□□□ -0.32
CPSF4-208ENST00000452047 DCDC2BA2VCK2 349 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 M0QYV0 167 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 HOXB2P14652 356 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 NTSR1P30989 418 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 GBP1P32455 592 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 LIMK1P53667 647 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 STILQ15468 1287 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 CAMK4Q16566 473 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 BSPRYQ5W0U4 402 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 PMF1Q6P1K2 205 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 DENND1CQ8IV53 801 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 C12orf50Q8NA57 414 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-208ENST00000452047 RLN3Q8WXF3 142 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 EDEM1Q92611 657 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 GABRG3Q99928 467 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 INTS2Q9H0H0 1204 aaKnown RBP13.05□□□□□ -0.32
CPSF4-208ENST00000452047 VPS45Q9NRW7 570 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 CHMP5Q9NZZ3 219 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 RWDD2AQ9UIY3 292 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 SLC27A6Q9Y2P4 619 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
CPSF4-208ENST00000452047 GFRA2O00451 464 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 LCP1P13796 627 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 GABRG2P18507 467 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 WASP42768 502 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms