RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 DCDC2BA2VCK2 349 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 DCLK1O15075 740 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 MAP3K13O43283 966 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 HMBSP08397 361 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 MPLP40238 635 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 PGFP49763 221 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 PMS1P54277 932 aaKnown RBP22.71■■□□□ 1.23
C9orf3-208ENST00000451893 RAD23BP54727 409 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 GOLGA7BQ2TAP0 167 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 FILIP1LQ4L180 1135 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 KLHDC10Q6PID8 442 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 CNOT6LQ96LI5 555 aaKnown RBP22.71■■□□□ 1.23
C9orf3-208ENST00000451893 LRRC4Q9HBW1 653 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 OSER1Q9NX31 292 aa22.71■■□□□ 1.23
C9orf3-208ENST00000451893 LIMA1Q9UHB6 759 aaKnown RBP22.71■■□□□ 1.23
C9orf3-208ENST00000451893 THADAQ6YHU6 1953 aa22.7■■□□□ 1.23
C9orf3-208ENST00000451893 FRYLO94915 3013 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 TYRP14679 529 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 BCAT1P54687 386 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 COG7P83436 770 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 EFEMP1Q12805 493 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 SF3A2Q15428 464 aaKnown RBP22.7■■□□□ 1.22
C9orf3-208ENST00000451893 PIGZQ86VD9 579 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 TERB1Q8NA31 727 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 IL17RCQ8NAC3 791 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 HMGB4Q8WW32 186 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 BHMTQ93088 406 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 WBP2Q969T9 261 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 TRIM44Q96DX7 344 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-208ENST00000451893 ZC3H10Q96K80 434 aaKnown RBP22.7■■□□□ 1.22
C9orf3-208ENST00000451893 CEP63Q96MT8 703 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 NT5C1BQ96P26 610 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 DUSP9Q99956 384 aaKnown RBP22.7■■□□□ 1.22
C9orf3-208ENST00000451893 ZDHHC4Q9NPG8 344 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 IFNKQ9P0W0 207 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 ZNF510Q9Y2H8 683 aa22.7■■□□□ 1.22
C9orf3-208ENST00000451893 MYO18AQ92614 2054 aaKnown RBP22.7■■□□□ 1.22
C9orf3-208ENST00000451893 TCRBV21S2A2A0A5A6 115 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 MED19A0JLT2 244 aaPredicted RBP22.69■■□□□ 1.22
C9orf3-208ENST00000451893 ZNF806P0C7X5 589 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 ATP1A3P13637 1013 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 BYSLQ13895 437 aaKnown RBP22.69■■□□□ 1.22
C9orf3-208ENST00000451893 EMC10Q5UCC4 262 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 ARHGAP17Q68EM7 881 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 SFTPA1Q8IWL2 248 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 SIX6OS1Q8N1H7 587 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 ANKRD52Q8NB46 1076 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 MDGA1Q8NFP4 955 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 SRRTQ9BXP5 876 aaKnown RBP22.69■■□□□ 1.22
C9orf3-208ENST00000451893 DCLK3Q9C098 648 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 DUSP15Q9H1R2 295 aaPredicted RBP22.69■■□□□ 1.22
C9orf3-208ENST00000451893 VPS45Q9NRW7 570 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 CLIC5Q9NZA1 410 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 TSPAN16Q9UKR8 245 aa22.69■■□□□ 1.22
C9orf3-208ENST00000451893 SGK1O00141 431 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 SLC30A4O14863 429 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 GNA14O95837 355 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 FMO5P49326 533 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 DHPSP49366 369 aaPredicted RBP22.68■■□□□ 1.22
C9orf3-208ENST00000451893 TKTL1P51854 596 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 YWHAGP61981 247 aaKnown RBP eCLIP22.68■■□□□ 1.22
C9orf3-208ENST00000451893 BST2Q10589 180 aaKnown RBP22.68■■□□□ 1.22
C9orf3-208ENST00000451893 TCP11X2Q5H9J9 407 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 ETFBKMTQ8IXQ9 262 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 PPM1KQ8N3J5 372 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 RNF139Q8WU17 664 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 SLC35C1Q96A29 364 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 UBXN6Q9BZV1 441 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 XPO4Q9C0E2 1151 aaKnown RBP22.68■■□□□ 1.22
C9orf3-208ENST00000451893 IMPACTQ9P2X3 320 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 PCDHB4Q9Y5E5 795 aa22.68■■□□□ 1.22
C9orf3-208ENST00000451893 DMXL1Q9Y485 3027 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 GDF9O60383 454 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 CYBBP04839 570 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 TPM2P07951 284 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 HOXB2P14652 356 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 CHKAP35790 457 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 KIR2DL1P43626 348 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-208ENST00000451893 DGKGP49619 791 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 MESP2Q0VG99 397 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 TMEM92Q6UXU6 159 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 CYP2U1Q7Z449 544 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 SCD5Q86SK9 330 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 RASSF3Q86WH2 238 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 ZC3H3Q8IXZ2 948 aaKnown RBP22.67■■□□□ 1.22
C9orf3-208ENST00000451893 DRC7Q8IY82 874 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 CHPFQ8IZ52 775 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 KCNV2Q8TDN2 545 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 DDX1Q92499 740 aaKnown RBP22.67■■□□□ 1.22
C9orf3-208ENST00000451893 MARCH2Q9P0N8 246 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 COQ4Q9Y3A0 265 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 USP3Q9Y6I4 520 aa22.67■■□□□ 1.22
C9orf3-208ENST00000451893 A0A1B0GTH6 734 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 SLC12A8A0AV02 714 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 ANTXRLA6NF34 631 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 KCNJ18B7U540 433 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 XPO1O14980 1071 aaKnown RBP22.66■■□□□ 1.22
C9orf3-208ENST00000451893 STC2O76061 302 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 ZBED1O96006 694 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 PTMAP06454 111 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms