RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 COL4A2P08572 1712 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 SCAMP3O14828 347 aaKnown RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 HOXC11O43248 304 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 PAPSS1O43252 624 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 CBFA2T2O43439 604 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 LATS1O95835 1130 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 APODP05090 189 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 CHRNB1P11230 501 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 CORO1AP31146 461 aaKnown RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 GBP1P32455 592 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 CDH5P33151 784 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 SLC11A2P49281 568 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 GALK1P51570 392 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 CCR3P51677 355 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 TBX4P57082 545 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 CDK17Q00537 523 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 FANCCQ00597 558 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 RING1Q06587 406 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 NNTQ13423 1086 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 E2F5Q15329 346 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 TRIP4Q15650 581 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 TAF3Q5VWG9 929 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 RHBDF2Q6PJF5 856 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 TXNDC11Q6PKC3 985 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 BHLHA9Q7RTU4 235 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 SPEM1Q8N4L4 309 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 EPS8L1Q8TE68 723 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 CPXM1Q96SM3 734 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 PNKPQ96T60 521 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 BBS2Q9BXC9 721 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 IRX2Q9BZI1 471 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 NUCKS1Q9H1E3 243 aaKnown RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 RRN3Q9NYV6 651 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 DLGAP2Q9P1A6 1054 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 DEC1Q9P2X7 70 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 SFMBT1Q9UHJ3 866 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 SLC12A6Q9UHW9 1150 aa12.57□□□□□ -0.4
SMPD4-212ENST00000451542 MTF2Q9Y483 593 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-212ENST00000451542 TYW5A2RUC4 315 aaKnown RBP12.56□□□□□ -0.4
SMPD4-212ENST00000451542 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-212ENST00000451542 TEX33O43247 280 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 APOEP02649 317 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 SLC2A3P11169 496 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 SCNN1AP37088 669 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 NSFP46459 744 aaKnown RBP12.56□□□□□ -0.4
SMPD4-212ENST00000451542 CXCL12P48061 93 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 SLC6A3Q01959 620 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 ARID5AQ03989 594 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 NR1I3Q14994 352 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 ANGPT1Q15389 498 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 DCAF6Q58WW2 860 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 Q6ZNB5 142 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
SMPD4-212ENST00000451542 DENND1CQ8IV53 801 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 CPXM2Q8N436 756 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 WDTC1Q8N5D0 677 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 ZNF557Q8N988 423 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-212ENST00000451542 CLEC4CQ8WTT0 213 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 SEPT11Q9NVA2 429 aaKnown RBP12.56□□□□□ -0.4
SMPD4-212ENST00000451542 MARK1Q9P0L2 795 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 FBXO4Q9UKT5 387 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 STAP1Q9ULZ2 295 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 TLR6Q9Y2C9 796 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 PAXBP1Q9Y5B6 917 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 MYOFQ9NZM1 2061 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 MUC3AQ02505 3323 aa12.56□□□□□ -0.4
SMPD4-212ENST00000451542 NEDD8-MDP1E9PL57 170 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 EPHB6O15197 1021 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 GABBR2O75899 941 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 MMEP08473 750 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 GRIA2P42262 883 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 NRLP54845 237 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 CCINQ13939 588 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 PTPN20Q4JDL3 420 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 FIGNQ5HY92 759 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 SFMBT2Q5VUG0 894 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 NAA35Q5VZE5 725 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 FSTL4Q6MZW2 842 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 ZC3H14Q6PJT7 736 aaKnown RBP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 TPGS1Q6ZTW0 290 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 SND1Q7KZF4 910 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 SLC26A9Q7LBE3 791 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 TMEM25Q86YD3 366 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 CCDC117Q8IWD4 279 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 DQX1Q8TE96 717 aaKnown RBP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 DDX1Q92499 740 aaKnown RBP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 ATOH1Q92858 354 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 RNF34Q969K3 372 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 AZIN2Q96A70 460 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 ACDQ96AP0 544 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 NAP1L5Q96NT1 182 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 FAM126AQ9BYI3 521 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 FAM204AQ9H8W3 233 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 ARHGEF4Q9NR80 690 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■□□□□ 11
SMPD4-212ENST00000451542 CYTH4Q9UIA0 394 aa12.55□□□□□ -0.4
SMPD4-212ENST00000451542 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
SMPD4-212ENST00000451542 AGO1Q9UL18 857 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms