RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 DAOAP59103 153 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 MRPS21P82921 87 aaKnown RBP10.13□□□□□ -0.79
USP54-207ENST00000451492 COG7P83436 770 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 RSPO4Q2I0M5 234 aaPredicted RBP10.13□□□□□ -0.79
USP54-207ENST00000451492 EGFLAMQ63HQ2 1017 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 DENND1BQ6P3S1 775 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 KLHDC10Q6PID8 442 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 FOXR2Q6PJQ5 311 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 LCLAT1Q6UWP7 414 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 GBP6Q6ZN66 633 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 Q6ZNB5 142 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 PASD1Q8IV76 773 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 CAMKK1Q8N5S9 505 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 KIAA1958Q8N8K9 716 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 MLKLQ8NB16 471 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 CCDC26Q8TAB7 109 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 FAM149B1Q96BN6 582 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 P2RY11Q96G91 374 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 UBXN6Q9BZV1 441 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 ARRDC1-AS1Q9H2J1 176 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 OLA1Q9NTK5 396 aaKnown RBP10.13□□□□□ -0.79
USP54-207ENST00000451492 LMBRD1Q9NUN5 540 aa10.13□□□□□ -0.79
USP54-207ENST00000451492 AJAP1Q9UKB5 411 aaPredicted RBP10.13□□□□□ -0.79
USP54-207ENST00000451492 AGO1Q9UL18 857 aaKnown RBP10.13□□□□□ -0.79
USP54-207ENST00000451492 MUC22E2RYF6 1773 aaPredicted RBP10.13□□□□□ -0.79
USP54-207ENST00000451492 CACNG3O60359 315 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 LTFP02788 710 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 RETP07949 1114 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 HOXB2P14652 356 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 BCKDHBP21953 392 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 KCNA4P22459 653 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 TNFRSF4P43489 277 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 KIR2DL1P43626 348 aaPredicted RBP10.12□□□□□ -0.79
USP54-207ENST00000451492 ZNF132P52740 706 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 MFAP3P55082 362 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 SF3A2Q15428 464 aaKnown RBP10.12□□□□□ -0.79
USP54-207ENST00000451492 STILQ15468 1287 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 CNGA2Q16280 664 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 CRY1Q16526 586 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 EXOC3L4Q17RC7 722 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 PKDCCQ504Y2 493 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 EOGTQ5NDL2 527 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 BSPRYQ5W0U4 402 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 PM20D1Q6GTS8 502 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 NUDT18Q6ZVK8 323 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 ARMCX6Q7L4S7 300 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 IRF2BP1Q8IU81 584 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 ADAM32Q8TC27 787 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 DDI1Q8WTU0 396 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 RLN3Q8WXF3 142 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 KCTD13Q8WZ19 329 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 GOLGA1Q92805 767 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 PLD4Q96BZ4 506 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 GBP4Q96PP9 640 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 ACOX2Q99424 681 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 DCLK3Q9C098 648 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 POLMQ9NP87 494 aaPredicted RBP10.12□□□□□ -0.79
USP54-207ENST00000451492 CNGB3Q9NQW8 809 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 ABCC13Q9NSE7 274 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 SEMA4GQ9NTN9 838 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 WDR35Q9P2L0 1181 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 APEX2Q9UBZ4 518 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 DACH1Q9UI36 760 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 KIAA1257Q9ULG3 409 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 RAD54BQ9Y620 910 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 OTOGLQ3ZCN5 2332 aa10.12□□□□□ -0.79
USP54-207ENST00000451492 SYNJ2BP-COX16A0A087WUM0 186 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 KCNJ18B7U540 433 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 PRRT4C9JH25 899 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 MED7O43513 233 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 GDF9O60383 454 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 ADAM23O75077 832 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 GABBR2O75899 941 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 ALDH1A2O94788 518 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 MOCS2O96007 188 aaPredicted RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 CYBBP04839 570 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 NCAM1P13591 858 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 HOXA6P31267 233 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 CHKAP35790 457 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 HARS2P49590 506 aaKnown RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 CREB5Q02930 508 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 KCNJ12Q14500 433 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 ELF2Q15723 593 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 MAN2A1Q16706 1144 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 PLK5Q496M5 336 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 PREPLQ4J6C6 727 aaPredicted RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 AASDHQ4L235 1098 aaPredicted RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 FYB2Q5VWT5 728 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 PRR23CQ6ZRP0 262 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 TRMT11Q7Z4G4 463 aaKnown RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 CACUL1Q86Y37 369 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 FAM114A1Q8IWE2 563 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 CHPFQ8IZ52 775 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 FRMD1Q8N878 549 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 GPT2Q8TD30 523 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 SLC35F5Q8WV83 523 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 TUBGCP2Q9BSJ2 902 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 DUSP15Q9H1R2 295 aaPredicted RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 SLC6A17Q9H1V8 727 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms