RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 PMS1P54277 932 aaKnown RBP28.47■■■□□ 2.15
USP42-204ENST00000451154 COG7P83436 770 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 SPDYCQ5MJ68 293 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 SYT12Q8IV01 421 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 NDRG1Q92597 394 aaKnown RBP28.47■■■□□ 2.15
USP42-204ENST00000451154 CDK5RAP1Q96SZ6 601 aaKnown RBP28.47■■■□□ 2.15
USP42-204ENST00000451154 TSG101Q99816 390 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 CD248Q9HCU0 757 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 FBXO10Q9UK96 956 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 ANGPTL2Q9UKU9 493 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 ZNF510Q9Y2H8 683 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 RAD54BQ9Y620 910 aa28.47■■■□□ 2.15
USP42-204ENST00000451154 TNRC6BQ9UPQ9 1833 aaKnown RBP28.47■■■□□ 2.15
USP42-204ENST00000451154 WASH3PC4AMC7 463 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 ZBTB24O43167 697 aaPredicted RBP28.46■■■□□ 2.15
USP42-204ENST00000451154 ITPKAP23677 461 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 CORO1AP31146 461 aaKnown RBP28.46■■■□□ 2.15
USP42-204ENST00000451154 NOVA1P51513 510 aaKnown RBP28.46■■■□□ 2.15
USP42-204ENST00000451154 FKBP3Q00688 224 aaKnown RBP28.46■■■□□ 2.15
USP42-204ENST00000451154 UAP1L1Q3KQV9 507 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 RAB41Q5JT25 222 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 LYSMD4Q5XG99 296 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 GSDMAQ96QA5 445 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 GABRG3Q99928 467 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 CACNA2D2Q9NY47 1150 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 EVLQ9UI08 416 aaPredicted RBP28.46■■■□□ 2.15
USP42-204ENST00000451154 CEP295Q9C0D2 2601 aa28.46■■■□□ 2.15
USP42-204ENST00000451154 ATXN2Q99700 1313 aaKnown RBP28.45■■■□□ 2.15
USP42-204ENST00000451154 GOLGA6L4A6NEF3 574 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 TULP2O00295 520 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 KRT37O76014 449 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 NDUFV2P19404 249 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 TKTL1P51854 596 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 YWHAGP61981 247 aaKnown RBP eCLIP28.45■■■□□ 2.14
USP42-204ENST00000451154 RPL6Q02878 288 aaKnown RBP28.45■■■□□ 2.14
USP42-204ENST00000451154 RSRC2Q7L4I2 434 aaKnown RBP28.45■■■□□ 2.14
USP42-204ENST00000451154 ARHGAP18Q8N392 663 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 ENGASEQ8NFI3 743 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 NUSAP1Q9BXS6 441 aaKnown RBP28.45■■■□□ 2.14
USP42-204ENST00000451154 SLC6A17Q9H1V8 727 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 MARCH2Q9P0N8 246 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 PILRBQ9UKJ0 227 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 AGO1Q9UL18 857 aaKnown RBP28.45■■■□□ 2.14
USP42-204ENST00000451154 COQ4Q9Y3A0 265 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 GTF3C3Q9Y5Q9 886 aa28.45■■■□□ 2.14
USP42-204ENST00000451154 SLC12A8A0AV02 714 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 TRIM49BA6NDI0 452 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 SLC16A3O15427 465 aaKnown RBP28.44■■■□□ 2.14
USP42-204ENST00000451154 AP5Z1O43299 807 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 PENKP01210 267 aaPredicted RBP28.44■■■□□ 2.14
USP42-204ENST00000451154 SLC8A3P57103 927 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 CUL2Q13617 745 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 GOLGA7BQ2TAP0 167 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 COBLL1Q53SF7 1204 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 SH3PXD2AQ5TCZ1 1133 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 FYB2Q5VWT5 728 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 SLC36A4Q6YBV0 504 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 DENND1CQ8IV53 801 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 ZC3H3Q8IXZ2 948 aaKnown RBP28.44■■■□□ 2.14
USP42-204ENST00000451154 DCLK3Q9C098 648 aa28.44■■■□□ 2.14
USP42-204ENST00000451154 FAM124BQ9H5Z6 455 aaPredicted RBP28.44■■■□□ 2.14
USP42-204ENST00000451154 IGHV1OR15-9A0A0B4J2B8 117 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 SMC2O95347 1197 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 ZBED1O96006 694 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 CHKAP35790 457 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 PDE4CQ08493 712 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 LMAN2Q12907 356 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 LRMPQ12912 555 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 PM20D1Q6GTS8 502 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 SMARCE1Q969G3 411 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 ULBP1Q9BZM6 244 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 STRIP2Q9ULQ0 834 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 CYP8B1Q9UNU6 501 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 FRYQ5TBA9 3013 aa28.43■■■□□ 2.14
USP42-204ENST00000451154 PCNX2A6NKB5 2137 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 ADAMTS9Q9P2N4 1935 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 MAPK8P45983 427 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 ISM2Q6H9L7 571 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 SPATA20Q8TB22 786 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 UBA3Q8TBC4 463 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 FSCN3Q9NQT6 498 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 ARMCX3Q9UH62 379 aaPredicted RBP28.42■■■□□ 2.14
USP42-204ENST00000451154 TSPAN16Q9UKR8 245 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 SLC27A6Q9Y2P4 619 aa28.42■■■□□ 2.14
USP42-204ENST00000451154 GFRA2O00451 464 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 ZNF217O75362 1048 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 CFIP05156 583 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 CD19P15391 556 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 ENGP17813 658 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 MFAP3P55082 362 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 SHC2P98077 582 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 ZNF33AQ06730 810 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 ST3GAL2Q16842 350 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 GEN1Q17RS7 908 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 SGO2Q562F6 1265 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 SLC23A3Q6PIS1 610 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 BHLHA9Q7RTU4 235 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 SLC35C1Q96A29 364 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 CD93Q9NPY3 652 aa28.41■■■□□ 2.14
USP42-204ENST00000451154 CLEC4EQ9ULY5 219 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms