RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 ULBP1Q9BZM6 244 aa13.07□□□□□ -0.32
NUP85-202ENST00000449421 DHX35Q9H5Z1 703 aaKnown RBP13.07□□□□□ -0.32
NUP85-202ENST00000449421 TBC1D13Q9NVG8 400 aa13.07□□□□□ -0.32
NUP85-202ENST00000449421 PCDH10Q9P2E7 1040 aa13.07□□□□□ -0.32
NUP85-202ENST00000449421 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
NUP85-202ENST00000449421 NFS1Q9Y697 457 aa13.07□□□□□ -0.32
NUP85-202ENST00000449421 H7C0C1 242 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 M0QYT0 321 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 EIF3HO15372 352 aaKnown RBP eCLIP13.06□□□□□ -0.32
NUP85-202ENST00000449421 BEST1O76090 585 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 IFNB1P01574 187 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 LTFP02788 710 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 CD48P09326 243 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 ATP5DP30049 168 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 L1CAMP32004 1257 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 ATP5OP48047 213 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 WDR5P61964 334 aaKnown RBP13.06□□□□□ -0.32
NUP85-202ENST00000449421 SMARCB1Q12824 385 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 EFHC2Q5JST6 749 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 EMC10Q5UCC4 262 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 PM20D1Q6GTS8 502 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 PPP1R21Q6ZMI0 780 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 CYP4V2Q6ZWL3 525 aaPredicted RBP13.06□□□□□ -0.32
NUP85-202ENST00000449421 CCDC25Q86WR0 208 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 CDKL3Q8IVW4 592 aaPredicted RBP13.06□□□□□ -0.32
NUP85-202ENST00000449421 PPIL6Q8IXY8 311 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 PLD5Q8N7P1 536 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 RIN2Q8WYP3 895 aaPredicted RBP13.06□□□□□ -0.32
NUP85-202ENST00000449421 TOP1MTQ969P6 601 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 NTAN1Q96AB6 310 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 RTP3Q9BQQ7 232 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 TMEM121Q9BTD3 319 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 PAK5Q9P286 719 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 CACNG4Q9UBN1 327 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 FZD10Q9ULW2 581 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 RAD54BQ9Y620 910 aa13.06□□□□□ -0.32
NUP85-202ENST00000449421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.05□□□□□ -0.32
NUP85-202ENST00000449421 BCLAF3A2AJT9 711 aaKnown RBP13.05□□□□□ -0.32
NUP85-202ENST00000449421 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 OR6C75A6NL08 312 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 HACD1B0YJ81 288 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 H7C4K7 107 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 RIPK2O43353 540 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 DDHD2O94830 711 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 TTC4O95801 387 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 IVLP07476 585 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 BDNFP23560 247 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 IL4RP24394 825 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 CYP2F1P24903 491 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 HCAR3P49019 387 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 VPS41P49754 854 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 ZNF844Q08AG5 666 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 SLC29A2Q14542 456 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 KRT71Q3SY84 523 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
NUP85-202ENST00000449421 ZC3H12AQ5D1E8 599 aaKnown RBP13.05□□□□□ -0.32
NUP85-202ENST00000449421 PPP6R3Q5H9R7 873 aaPredicted RBP13.05□□□□□ -0.32
NUP85-202ENST00000449421 VSTM1Q6UX27 236 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
NUP85-202ENST00000449421 CENPUQ71F23 418 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 OTOP2Q7RTS6 562 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 BNIPLQ7Z465 357 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 ZMIZ2Q8NF64 920 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 PHOSPHO2Q8TCD6 241 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 PKMYT1Q99640 499 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 FAM118BQ9BPY3 351 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 ZCWPW1Q9H0M4 648 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 NRDE2Q9H7Z3 1164 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 PPCSQ9HAB8 311 aa13.05□□□□□ -0.32
NUP85-202ENST00000449421 FNDC1Q4ZHG4 1894 aaPredicted RBP13.05□□□□□ -0.32
NUP85-202ENST00000449421 HHLA1C9JL84 531 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 I3L4J1 428 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 TRIM66O15016 1216 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 AMHP03971 560 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 NCAM1P13591 858 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 TSHRP16473 764 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 GRIK1P39086 918 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 NDUFV1P49821 464 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 ARL4CP56559 192 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 C1orf228Q6PIY5 440 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 ZNF280BQ86YH2 543 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 NPAS4Q8IUM7 802 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 PCDH19Q8TAB3 1148 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 HASPINQ8TF76 798 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 ARL8AQ96BM9 186 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 PGM2Q96G03 612 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 PRO3102Q9H379 93 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 CENPHQ9H3R5 247 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 ABCC13Q9NSE7 274 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 COMMD8Q9NX08 183 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 ADAM28Q9UKQ2 775 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 USP3Q9Y6I4 520 aa13.04□□□□□ -0.32
NUP85-202ENST00000449421 SF3B1O75533 1304 aaKnown RBP eCLIP13.04□□□□□ -0.323e-6■■■■■ 137.9
NUP85-202ENST00000449421 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
NUP85-202ENST00000449421 NRP1O14786 923 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms