RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 PLD3Q8IV08 490 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 ZNF655Q8N720 491 aaPredicted RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 HSPA9P38646 679 aaKnown RBP13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CYP4Z1Q86W10 505 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 ELMO3Q96BJ8 720 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 ELOVL6Q9H5J4 265 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 GSAPA4D1B5 854 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 ERI2A8K979 691 aaKnown RBP13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 LGALS2P05162 132 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 NOMO2Q5JPE7 1267 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 PARGQ86W56 976 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 ELOVL4Q9GZR5 314 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 ACTR5Q9H9F9 607 aaPredicted RBP13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 AHSPQ9NZD4 102 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.314e-8■■■■■ 61
AC006001.3-201ENST00000449307 E9PBE3 544 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 TBL1XO60907 577 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 DNTTP04053 509 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 ATAD3BQ5T9A4 648 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 DENND1CQ8IV53 801 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CENPLQ8N0S6 344 aaPredicted RBP13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 COPS5Q92905 334 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 COL26A1Q96A83 441 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CNPY3Q9BT09 278 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CEP41Q9BYV8 373 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CAB39Q9Y376 341 aaPredicted RBP13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 LACTBL1A8MY62 500 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 ARHGEF9O43307 516 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 C4orf22Q6V702 233 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 SCAIQ8N9R8 606 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 MTFMTQ96DP5 389 aaKnown RBP13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 ACTR8Q9H981 624 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 NFASCO94856 1347 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CDC42BPAQ5VT25 1732 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CARNS1A5YM72 827 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 FEN1P39748 380 aaKnown RBP13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CBWD1Q9BRT8 395 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 CISHQ9NSE2 258 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 VANGL2Q9ULK5 521 aa13.1□□□□□ -0.31
AC006001.3-201ENST00000449307 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TCP11X1B4DZS4 312 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 MAN1A2O60476 641 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 OR6A2O95222 327 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 PDHA1P08559 390 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 SERPINF2P08697 491 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 GPR1P46091 355 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 SEC13P55735 322 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 USP41Q3LFD5 358 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 DENND1BQ6P3S1 775 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 ZNF410Q86VK4 478 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 PPIL6Q8IXY8 311 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D13Q9NVG8 400 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3DA0A087WVF3 549 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3IA0A087WXS9 549 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3EA0A087X179 549 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3KA0A087X1G2 549 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3FA6NER0 549 aaPredicted RBP13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3LB9A6J9 549 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 SNRPAP09012 282 aaKnown RBP13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3HP0C7X1 549 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 POU1F1P28069 291 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 HTR1BP28222 390 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3GQ6DHY5 549 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3CQ6IPX1 549 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 C16orf89Q6UX73 402 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 KRT77Q7Z794 578 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 ADCK1Q86TW2 530 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TBC1D3Q8IZP1 549 aaPredicted RBP13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 VPS33BQ9H267 617 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TMEM245Q9H330 911 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 IMPAD1Q9NX62 359 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TMCC3Q9ULS5 477 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 USP20Q9Y2K6 914 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 ATP5C1P36542 298 aaKnown RBP13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 SERPINB11Q96P15 392 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 CTNNAL1Q9UBT7 734 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 RPTORQ8N122 1335 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 POU6F1Q14863 301 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 UBXN2BQ14CS0 331 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 CHI3L2Q15782 390 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 LRRC8BQ6P9F7 803 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 CDK20Q8IZL9 346 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 BTBD9Q96Q07 612 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 AGPAT5Q9NUQ2 364 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 A0A1W2PQC6 194 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 ZNF839A8K0R7 811 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 TYMPP19971 482 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 SREBF1P36956 1147 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 CDH8P55286 799 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 CCT7Q99832 543 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 FTHL17Q9BXU8 183 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 GLUD1P00367 558 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 HMGCRP04035 888 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 CD52P31358 61 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 AGMOQ6ZNB7 445 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms