RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TOP6BLQ8N6T0 577 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 MAPK15Q8TD08 544 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 MRPL42Q9Y6G3 142 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLC30A1Q9Y6M5 507 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYH9P35579 1960 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLX4Q8IY92 1834 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 SMCHD1A6NHR9 2005 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 DNAJC25-GNG10A0A024R161 153 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 ERLIN1O75477 346 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CTSAP10619 480 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 KCNJ5P48544 419 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 FANCCQ00597 558 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 KLHL40Q2TBA0 621 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 MAP4K3Q8IVH8 894 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 KLHDC9Q8NEP7 349 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 HNRNPLLQ8WVV9 542 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 EDAQ92838 391 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CD101Q93033 1021 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 REXO5Q96IC2 774 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 ATP13A1Q9HD20 1204 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 PLCB1Q9NQ66 1216 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 KLHL11Q9NVR0 708 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 C5P01031 1676 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CNOT1A5YKK6 2376 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 IGSF6O95976 241 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 APOA4P06727 396 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 KRT7P08729 469 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYP3A5P20815 502 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 POLR2LP62875 67 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 DYNLT1P63172 113 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 SULT2A1Q06520 285 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 SPIRE1Q08AE8 756 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYP2A13Q16696 494 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 MARK2Q7KZI7 788 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 DNAJB7Q7Z6W7 309 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMTC1Q8IUR5 882 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 METTL21AQ8WXB1 218 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYLPFQ96A32 169 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRAIPQ9BWF2 469 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 GPR174Q9BXC1 333 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 NRDE2Q9H7Z3 1164 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRIM10Q9UDY6 481 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 HCN2Q9UL51 889 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 NCOR1O75376 2440 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 RARGP13631 454 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 GRK3P35626 688 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRIM61Q5EBN2 209 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 DARS2Q6PI48 645 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 LGI2Q8N0V4 545 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 JPH3Q8WXH2 748 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CDC6Q99741 560 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 DHX33Q9H6R0 707 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 AGFG2O95081 481 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZFXP17010 805 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 RPS6KA1Q15418 735 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 RESP18Q5W5W9 173 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 C18orf25Q96B23 403 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMEM176AQ96HP8 235 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZDHHC6Q9H6R6 413 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 KCNMB3Q9NPA1 279 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 OLFML3Q9NRN5 406 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 ABCC13Q9NSE7 274 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZDHHC7Q9NXF8 308 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 KLF8O95600 359 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 OXTRP30559 389 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 GTF2H1P32780 548 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 NDST1P52848 882 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 VCPP55072 806 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 TAF10Q12962 218 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CUL2Q13617 745 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 DSG2Q14126 1118 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 PLEKHG4Q58EX7 1191 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 PPM1JQ5JR12 505 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 LGSNQ5TDP6 509 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 LEKR1Q6ZMV7 388 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 HEATR4Q86WZ0 1026 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CCDC105Q8IYK2 499 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZBTB10Q96DT7 871 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 CLIP3Q96DZ5 547 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 EIF2AQ9BY44 585 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 FBRSL1Q9HCM7 1045 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 INTS10Q9NVR2 710 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 FBXL5Q9UKA1 691 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 TPX2Q9ULW0 747 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 PLAGL2Q9UPG8 496 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 TAF6LQ9Y6J9 622 aa5.83□□□□□ -1.48
CDC42BPA-209ENST00000448940 SUPT3HB4E1H0 165 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 EEF2KO00418 725 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 GRM6O15303 877 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 GRAP2O75791 330 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ANXA5P08758 320 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 IRS1P35568 1242 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 DGKGP49619 791 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 GATMP50440 423 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 KCNQ1P51787 676 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CLCNKBP51801 687 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYP24A1Q07973 514 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 SDHAF4Q5VUM1 108 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CCDC110Q8TBZ0 833 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 SMARCD2Q92925 531 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms