RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 BNIPLQ7Z465 357 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 SPATA2LQ8IUW3 424 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ZCCHC9Q8N567 271 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ZMIZ2Q8NF64 920 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 HASPINQ8TF76 798 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 PGAP3Q96FM1 320 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 DEFB118Q96PH6 123 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 PKMYT1Q99640 499 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 TMEM109Q9BVC6 243 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ROPN1BQ9BZX4 212 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 STMN4Q9H169 189 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 DHX35Q9H5Z1 703 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ROPN1Q9HAT0 212 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 FZD10Q9ULW2 581 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 PTPRDP23468 1912 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 PATJQ8NI35 1801 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 H3BRJ5 948 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 H7C0C1 242 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 M0QYT0 321 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 RIPK2O43353 540 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 NBNO60934 754 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 TADA2AO75478 443 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 DDHD2O94830 711 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 OAZ2O95190 189 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ATP5OP48047 213 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 CDR1P51861 262 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ELAVL2Q12926 359 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 MMRN1Q13201 1228 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 XRCC4Q13426 336 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 NFE2Q16621 373 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ARL13BQ3SXY8 428 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 KRT71Q3SY84 523 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 TTMPQ5BVD1 217 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 EFHC2Q5JST6 749 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 C6orf118Q5T5N4 469 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 PM20D1Q6GTS8 502 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 DARS2Q6PI48 645 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 CDKL3Q8IVW4 592 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 PPIL6Q8IXY8 311 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 PLD5Q8N7P1 536 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 DBF4BQ8NFT6 615 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 NTAN1Q96AB6 310 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ARL8AQ96BM9 186 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 FUBP3Q96I24 572 aaKnown RBP eCLIP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 TTC25Q96NG3 672 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 CCDC77Q9BR77 488 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 COLEC11Q9BWP8 271 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 RNF208Q9H0X6 261 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 SEMA4AQ9H3S1 761 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 NRDE2Q9H7Z3 1164 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 NLRC5Q86WI3 1866 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 DCDC2CA8MYV0 355 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 HHLA1C9JL84 531 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 TP73O15350 636 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 TTC4O95801 387 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 ALDH2P05091 517 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 IVLP07476 585 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 CCL5P13501 91 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 PECAM1P16284 738 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 BDNFP23560 247 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 IL4RP24394 825 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 CYP2F1P24903 491 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 NDUFV1P49821 464 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 SLC29A2Q14542 456 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 CCDC142Q17RM4 750 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 RAB6CQ53S08 254 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 ANKRD33Q7Z3H0 272 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 ZNF280BQ86YH2 543 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 PCDH19Q8TAB3 1148 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 TOX2Q96NM4 488 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 KCNK16Q96T55 309 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 FERMT1Q9BQL6 677 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 TMEM175Q9BSA9 504 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 OXCT2Q9BYC2 517 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 RAB6CQ9H0N0 254 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 CDC42EP4Q9H3Q1 356 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 GPATCH2LQ9NWQ4 482 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 PAK5Q9P286 719 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 SAE1Q9UBE0 346 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 RABGEF1Q9UJ41 708 aa10.97□□□□□ -0.65
VIPAS39-203ENST00000448935 SF3B1O75533 1304 aaKnown RBP eCLIP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 BCLAF3A2AJT9 711 aaKnown RBP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 OR6C75A6NL08 312 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 HACD1B0YJ81 288 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 EIF3HO15372 352 aaKnown RBP eCLIP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 PQBP1O60828 265 aaKnown RBP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 ITGB1P05556 798 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 USP17L7P0C7H9 530 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 NCAM1P13591 858 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 TFE3P19532 575 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 ATP5DP30049 168 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 GYS2P54840 703 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 SCAPQ12770 1279 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 CA9Q16790 459 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 RNASEH2BQ5TBB1 312 aaKnown RBP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 EMC10Q5UCC4 262 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 C1orf228Q6PIY5 440 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 VSTM1Q6UX27 236 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 PPP1R21Q6ZMI0 780 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 KDM7AQ6ZMT4 941 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms