RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 TCP1P17987 556 aaKnown RBP12.41□□□□□ -0.42
SCAP-208ENST00000448217 TFE3P19532 575 aaPredicted RBP12.41□□□□□ -0.42
SCAP-208ENST00000448217 DDX6P26196 483 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCAP-208ENST00000448217 KPNA1P52294 538 aaPredicted RBP12.41□□□□□ -0.42
SCAP-208ENST00000448217 DEUP1Q05D60 604 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 RING1Q06587 406 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 MTA1Q13330 715 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 PPP2R5DQ14738 602 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 GRIN2CQ14957 1233 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 CTC1Q2NKJ3 1217 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 BRMS1LQ5PSV4 323 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 TAC4Q86UU9 113 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 PBKQ96KB5 322 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 PRDM12Q9H4Q4 367 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 PIGVQ9NUD9 493 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 DDX56Q9NY93 547 aaKnown RBP12.41□□□□□ -0.42
SCAP-208ENST00000448217 DNMT3BQ9UBC3 853 aaKnown RBP12.41□□□□□ -0.42
SCAP-208ENST00000448217 USTQ9Y2C2 406 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 TLR6Q9Y2C9 796 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 HBS1LQ9Y450 684 aaKnown RBP12.41□□□□□ -0.42
SCAP-208ENST00000448217 HYOU1Q9Y4L1 999 aa12.41□□□□□ -0.42
SCAP-208ENST00000448217 C2orf16Q68DN1 1984 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 CCDC195A0A1B0GUA6 201 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 ZNF487B1APH4 448 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.42
SCAP-208ENST00000448217 ENC1O14682 589 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 PRPSAP2O60256 369 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 SLC2A3P11169 496 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 TCF4P15884 667 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 IL1R2P27930 398 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 GABRR2P28476 465 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 ATP5C1P36542 298 aaKnown RBP12.4□□□□□ -0.42
SCAP-208ENST00000448217 ARSEP51690 589 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 RWDD2BP57060 319 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 TRIP4Q15650 581 aaPredicted RBP12.4□□□□□ -0.42
SCAP-208ENST00000448217 TAZQ16635 292 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 CDO1Q16878 200 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 RAB6CQ53S08 254 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 PRSS36Q5K4E3 855 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 ACBD5Q5T8D3 534 aaPredicted RBP12.4□□□□□ -0.42
SCAP-208ENST00000448217 ZNF697Q5TEC3 545 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 ANKRD54Q6NXT1 300 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 RSRC2Q7L4I2 434 aaKnown RBP12.4□□□□□ -0.42
SCAP-208ENST00000448217 HS6ST3Q8IZP7 471 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 EXD1Q8NHP7 514 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 MRPS31Q92665 395 aaKnown RBP12.4□□□□□ -0.42
SCAP-208ENST00000448217 ALG3Q92685 438 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 KRT35Q92764 455 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 PEBP4Q96S96 227 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 OSBPL9Q96SU4 736 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 RAB6CQ9H0N0 254 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 CCSER2Q9H7U1 834 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 FAM204AQ9H8W3 233 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCAP-208ENST00000448217 DDIT4Q9NX09 232 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 ARHGEF38Q9NXL2 777 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 MARCH2Q9P0N8 246 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 DNMT3LQ9UJW3 386 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.42
SCAP-208ENST00000448217 PACSIN2Q9UNF0 486 aaPredicted RBP12.4□□□□□ -0.42
SCAP-208ENST00000448217 SAR1BQ9Y6B6 198 aa12.4□□□□□ -0.42
SCAP-208ENST00000448217 KCNU1A8MYU2 1149 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 ZNF197O14709 1029 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 COCHO43405 550 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 MOSPD3O75425 235 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 RHOP08100 348 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 RARAP10276 462 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 WEE1P30291 646 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 PTPN7P35236 360 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 GTF2F1P35269 517 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCAP-208ENST00000448217 ADRA1BP35368 520 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 MARCKSL1P49006 195 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 ZNF135P52742 658 aaPredicted RBP12.39□□□□□ -0.43
SCAP-208ENST00000448217 COPS2P61201 443 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 SLC7A9P82251 487 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 ADGRE1Q14246 886 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 DPYSL2Q16555 572 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 C10orf120Q5SQS8 335 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 ERMARDQ5T6L9 678 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 DAB2IPQ5VWQ8 1189 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCAP-208ENST00000448217 GPR149Q86SP6 731 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 RCOR2Q8IZ40 523 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 RASGEF1CQ8N431 466 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 SHKBP1Q8TBC3 707 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 GCNAQ96QF7 691 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 CORO1BQ9BR76 489 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCAP-208ENST00000448217 RNF14Q9UBS8 474 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 FZD10Q9ULW2 581 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 EFR3BQ9Y2G0 817 aa12.39□□□□□ -0.43
SCAP-208ENST00000448217 HELZP42694 1942 aaKnown RBP12.39□□□□□ -0.43
SCAP-208ENST00000448217 ZRANB2O95218 330 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCAP-208ENST00000448217 TBX18O95935 607 aa12.38□□□□□ -0.43
SCAP-208ENST00000448217 CCR1P32246 355 aa12.38□□□□□ -0.43
SCAP-208ENST00000448217 CCR2P41597 374 aa12.38□□□□□ -0.43
SCAP-208ENST00000448217 ATXN1P54253 815 aaKnown RBP12.38□□□□□ -0.43
SCAP-208ENST00000448217 TBX4P57082 545 aa12.38□□□□□ -0.43
SCAP-208ENST00000448217 COG7P83436 770 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms