RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TRIM64BA6NI03 449 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 KPNA4O00629 521 aaPredicted RBP19.81■□□□□ 0.76
HMGA1-205ENST00000447654 ZBTB39O15060 712 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 ZBTB7AO95365 584 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 GCNT3O95395 438 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 PARNO95453 639 aaKnown RBP19.81■□□□□ 0.76
HMGA1-205ENST00000447654 PCYT1AP49585 367 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 TMPRSS15P98073 1019 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 TMEM214Q6NUQ4 689 aaKnown RBP19.81■□□□□ 0.76
HMGA1-205ENST00000447654 MTMR14Q8NCE2 650 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 AGBL3Q8NEM8 1001 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 TBC1D15Q8TC07 691 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 MRRFQ96E11 262 aaKnown RBP19.81■□□□□ 0.76
HMGA1-205ENST00000447654 STK39Q9UEW8 545 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 KLHL3Q9UH77 587 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 SLC8A2Q9UPR5 921 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 ERGIC3Q9Y282 383 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 AP4S1Q9Y587 144 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 PCDHB2Q9Y5E7 798 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 NOX1Q9Y5S8 564 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 E7ESA3 106 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 GOLGA8RI6L899 631 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 LIASO43766 372 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 PROCP04070 461 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 GLRA2P23416 452 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 HNRNPFP52597 415 aaKnown RBP19.81■□□□□ 0.76
HMGA1-205ENST00000447654 UBAP2LQ14157 1087 aaKnown RBP19.81■□□□□ 0.76
HMGA1-205ENST00000447654 TFDP1Q14186 410 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 PAOXQ6QHF9 649 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 ARCQ7LC44 396 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 EXD1Q8NHP7 514 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 FAM20AQ96MK3 541 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 SERPINI1Q99574 410 aa19.81■□□□□ 0.76
HMGA1-205ENST00000447654 DHX33Q9H6R0 707 aaKnown RBP19.81■□□□□ 0.76
HMGA1-205ENST00000447654 HEMK1Q9Y5R4 338 aaPredicted RBP19.81■□□□□ 0.76
HMGA1-205ENST00000447654 TBCAO75347 108 aaKnown RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 TRPA1O75762 1119 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 L1CAMP32004 1257 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 ARSEP51690 589 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 DPYSQ14117 519 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 FKBP1CQ5VVH2 108 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 ACAD10Q6JQN1 1059 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 ZNF746Q6NUN9 644 aaPredicted RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 USP6NLQ92738 828 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 TRIM11Q96F44 468 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 SH3GL1Q99961 368 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 OSBPL11Q9BXB4 747 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 C12orf65Q9H3J6 166 aaKnown RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 CLK4Q9HAZ1 481 aaKnown RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 ACP6Q9NPH0 428 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 MAN1C1Q9NR34 630 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 ERVK-11Q9UQG0 969 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 PSMD12O00232 456 aaPredicted RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 COPEO14579 308 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 ITGAXP20702 1163 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 ZNF76P36508 570 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 FMO1Q01740 532 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 GPS1Q13098 491 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 C6orf52Q5T4I8 152 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 FAM83AQ86UY5 434 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 SLC9A9Q8IVB4 645 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 WDR75Q8IWA0 830 aaKnown RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 RHOT1Q8IXI2 618 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 TMIGD2Q96BF3 282 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 C12orf43Q96C57 262 aaKnown RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 CCDC124Q96CT7 223 aaKnown RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 TRIM56Q9BRZ2 755 aaKnown RBP19.8■□□□□ 0.76
HMGA1-205ENST00000447654 RUSC1Q9BVN2 902 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 PCDH9Q9HC56 1237 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 MYOZ2Q9NPC6 264 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 ANAPC7Q9UJX3 599 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 TIMM22Q9Y584 194 aa19.8■□□□□ 0.76
HMGA1-205ENST00000447654 A0A0B4J269 797 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 DGKIO75912 1065 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 CCDC130P13994 396 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 BFSP1Q12934 665 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 TUBB3Q13509 450 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 GK3PQ14409 553 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 EGFLAMQ63HQ2 1017 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 HPS6Q86YV9 775 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 DEFB107AQ8IZN7 70 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 SHKBP1Q8TBC3 707 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 EIF2AK1Q9BQI3 630 aaKnown RBP19.79■□□□□ 0.76
HMGA1-205ENST00000447654 SEPT3Q9UH03 358 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 CHORDC1Q9UHD1 332 aaPredicted RBP19.79■□□□□ 0.76
HMGA1-205ENST00000447654 VPS28Q9UK41 221 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 ARHGAP26Q9UNA1 814 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 APOBEC2Q9Y235 224 aaKnown RBP19.79■□□□□ 0.76
HMGA1-205ENST00000447654 PLLPQ9Y342 182 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 IKBKGQ9Y6K9 419 aa19.79■□□□□ 0.76
HMGA1-205ENST00000447654 PMM2O15305 246 aa19.78■□□□□ 0.76
HMGA1-205ENST00000447654 VDRP11473 427 aa19.78■□□□□ 0.76
HMGA1-205ENST00000447654 HOXD11P31277 338 aaPredicted RBP19.78■□□□□ 0.76
HMGA1-205ENST00000447654 CA8P35219 290 aa19.78■□□□□ 0.76
HMGA1-205ENST00000447654 CYTH1Q15438 398 aa19.78■□□□□ 0.76
HMGA1-205ENST00000447654 CAPN12Q6ZSI9 719 aa19.78■□□□□ 0.76
HMGA1-205ENST00000447654 STXBP4Q6ZWJ1 553 aa19.78■□□□□ 0.76
HMGA1-205ENST00000447654 OTOP1Q7RTM1 612 aa19.78■□□□□ 0.76
HMGA1-205ENST00000447654 CARM1Q86X55 608 aa19.78■□□□□ 0.76
HMGA1-205ENST00000447654 SLC44A1Q8WWI5 657 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms