RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 RNF224P0DH78 156 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 SFNP31947 248 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 AVPR1AP37288 418 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 LSSP48449 732 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 ASIC1P78348 528 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CYP27A1Q02318 531 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 POU5F1BQ06416 359 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 NCBP1Q09161 790 aaKnown RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 BFSP1Q12934 665 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 DUSP4Q13115 394 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 SART3Q15020 963 aaKnown RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 ZNF77Q15935 545 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 SKIDA1Q1XH10 827 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 INAVAQ3KP66 663 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 RPS26P11Q5JNZ5 115 aaPredicted RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 ZNF280DQ6N043 979 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 OGFOD3Q6PK18 319 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 KANSL1Q7Z3B3 1105 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 FERMT3Q86UX7 667 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CDR2LQ86X02 465 aaPredicted RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 TP53INP2Q8IXH6 220 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 EFCAB13Q8IY85 973 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CADM4Q8NFZ8 388 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 ZNF564Q8TBZ8 553 aaPredicted RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 TMEM143Q96AN5 459 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 VCPIP1Q96JH7 1222 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CNDP2Q96KP4 475 aaKnown RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 UROC1Q96N76 676 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 ACAP3Q96P50 834 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CNNM2Q9H8M5 875 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 ZDHHC4Q9NPG8 344 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 RIC8AQ9NPQ8 531 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 ZBTB40Q9NUA8 1239 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 DUS2Q9NX74 493 aaKnown RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 TCEAL9Q9UHQ7 104 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 SNX11Q9Y5W9 270 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 HIVEP3Q5T1R4 2406 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 ARID1BQ8NFD5 2236 aaPredicted RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 TP53BP1Q12888 1972 aaPredicted RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 VPS37CA5D8V6 355 aaPredicted RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 H0Y8X5 98 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 NDUFS2O75306 463 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 LDOC1O95751 146 aaPredicted RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 DDX6P26196 483 aaKnown RBP eCLIP3.55□□□□□ -1.84
PMS1-215ENST00000447232 EIF2DP41214 584 aaKnown RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 ALDH1A3P47895 512 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 CSNK1EP49674 416 aaKnown RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 JAK3P52333 1124 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 GABREP78334 506 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 AP3B2Q13367 1082 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 NCAPHQ15003 741 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 CENPPQ6IPU0 288 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 B3GNT9Q6UX72 402 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 ITIH5Q86UX2 942 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 TICAM2Q86XR7 235 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 SRBD1Q8N5C6 995 aaKnown RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 EPS8L3Q8TE67 593 aaKnown RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 SSC4DQ8WTU2 575 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 MIB2Q96AX9 1013 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 YTHDC1Q96MU7 727 aaKnown RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 MMS19Q96T76 1030 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 NFKBIZQ9BYH8 718 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 THSD1Q9NS62 852 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 GEMIN8Q9NWZ8 242 aaKnown RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 WSB2Q9NYS7 404 aaPredicted RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 PLAAQ9Y263 795 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 SLCO1B1Q9Y6L6 691 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 PCSK5Q92824 1860 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 MEI4A8MW99 385 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 INO80B-WBP1J3KQ70 363 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 KAT7O95251 611 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 PLEKHA8P1O95397 391 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 NCAM1P13591 858 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 LIG1P18858 919 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 CD6P30203 668 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 TNFRSF4P43489 277 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 IFNAR2P48551 515 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 AFF3P51826 1226 aaKnown RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 CDR1P51861 262 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 FAM160A1Q05DH4 1040 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 GPR17Q13304 367 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 DCAF12L1Q5VU92 463 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 CDCP2Q5VXM1 449 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 PLA2G4FQ68DD2 849 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 TTC9BQ8N6N2 239 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 MAB21L3Q8N8X9 362 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 RDM1Q8NG50 284 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 PIGOQ8TEQ8 1089 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 PGLYRP2Q96PD5 576 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 MTMR9Q96QG7 549 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 CCNL2Q96S94 520 aaPredicted RBP3.55□□□□□ -1.84
PMS1-215ENST00000447232 LZTS2Q9BRK4 669 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 MIR1-1HGQ9H1L0 117 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 LINC00597Q9H2U6 94 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 UNC45AQ9H3U1 944 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 POLR1BQ9H9Y6 1135 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 CRIM1Q9NZV1 1036 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 HSFX1Q9UBD0 423 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 ADAMTS1Q9UHI8 967 aa3.55□□□□□ -1.84
PMS1-215ENST00000447232 ANKRD6Q9Y2G4 727 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms