RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ATXN2LQ8WWM7 1075 aaKnown RBP18.12■□□□□ 0.49
SMC6-206ENST00000446852 SMARCD1Q96GM5 515 aa18.12■□□□□ 0.49
SMC6-206ENST00000446852 CCT8L2Q96SF2 557 aa18.12■□□□□ 0.49
SMC6-206ENST00000446852 VPS37BQ9H9H4 285 aa18.12■□□□□ 0.49
SMC6-206ENST00000446852 TMLHEQ9NVH6 421 aa18.12■□□□□ 0.49
SMC6-206ENST00000446852 EXOC1LA0A1B0GW35 172 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 FBXO21O94952 628 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 USP17L7P0C7H9 530 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 SKIP12755 728 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 AMPD1P23109 780 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 NME3Q13232 169 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 BHLHA9Q7RTU4 235 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 OR10T2Q8NGX3 314 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 PXYLP1Q8TE99 480 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 LINC01599Q8WXQ3 324 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 RSPH1Q8WYR4 309 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 CENPTQ96BT3 561 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 XPO6Q96QU8 1125 aaKnown RBP18.11■□□□□ 0.49
SMC6-206ENST00000446852 TMEM209Q96SK2 561 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 ACBD6Q9BR61 282 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 CCDC77Q9BR77 488 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 STAP1Q9ULZ2 295 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 COL4A4P53420 1690 aaPredicted RBP18.11■□□□□ 0.49
SMC6-206ENST00000446852 A0A1W2PQ45 241 aaPredicted RBP18.11■□□□□ 0.49
SMC6-206ENST00000446852 A0A1W2PQY0 241 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 CFAP69A5D8W1 941 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 TOMM70O94826 608 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 INHAP05111 366 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 RDXP35241 583 aaKnown RBP18.11■□□□□ 0.49
SMC6-206ENST00000446852 INTS6LQ5JSJ4 861 aaKnown RBP18.11■□□□□ 0.49
SMC6-206ENST00000446852 FAM171BQ6P995 826 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 ADAM32Q8TC27 787 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 ZNF473Q8WTR7 871 aaKnown RBP18.11■□□□□ 0.49
SMC6-206ENST00000446852 PKMYT1Q99640 499 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 CSNK1G1Q9HCP0 422 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 CNGB3Q9NQW8 809 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 RGS18Q9NS28 235 aa18.11■□□□□ 0.49
SMC6-206ENST00000446852 ZMYND8Q9ULU4 1186 aaPredicted RBP18.11■□□□□ 0.49
SMC6-206ENST00000446852 MYO18AQ92614 2054 aaKnown RBP18.1■□□□□ 0.49
SMC6-206ENST00000446852 GMNCA6NCL1 334 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 C9IYK1 514 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 INPPL1O15357 1258 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 FAM107AO95990 144 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 VSTM1Q6UX27 236 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 FAM107BQ9H098 131 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 RAB6BQ9NRW1 208 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 DTLQ9NZJ0 730 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 PAK5Q9P286 719 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 SMAPO00193 183 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 ZFXP17010 805 aaPredicted RBP18.1■□□□□ 0.49
SMC6-206ENST00000446852 RNASELQ05823 741 aaKnown RBP18.1■□□□□ 0.49
SMC6-206ENST00000446852 DEUP1Q05D60 604 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 LRRTM3Q86VH5 581 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 METTL23Q86XA0 190 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 PSTKQ8IV42 348 aaKnown RBP18.1■□□□□ 0.49
SMC6-206ENST00000446852 SLC7A14Q8TBB6 771 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 UROC1Q96N76 676 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 ARHGEF4Q9NR80 690 aa18.1■□□□□ 0.49
SMC6-206ENST00000446852 AMHP03971 560 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 BDNFP23560 247 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 ATP5DP30049 168 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 SSTR1P30872 391 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 ARL4AP40617 200 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 NR2C2P49116 596 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 BBS9Q3SYG4 887 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 SLC45A4Q5BKX6 768 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 FAXCQ5TGI0 409 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 KCNT2Q6UVM3 1135 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 ZNF280BQ86YH2 543 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 CDKL3Q8IVW4 592 aaPredicted RBP18.09■□□□□ 0.49
SMC6-206ENST00000446852 PDIK1LQ8N165 341 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 SLC43A3Q8NBI5 491 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 FBXO36Q8NEA4 188 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 CCDC110Q8TBZ0 833 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 PYROXD1Q8WU10 500 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 ANLNQ9NQW6 1124 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 I6L893 689 aaPredicted RBP18.09■□□□□ 0.49
SMC6-206ENST00000446852 CAPN9O14815 690 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 CHADO15335 359 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 XRCC4Q13426 336 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 TMED2Q15363 201 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 CLLU1OSQ5K130 101 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 OVOS1Q6IE37 1185 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 RNF139Q8WU17 664 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 MAML1Q92585 1016 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 SUSD3Q96L08 255 aa18.09■□□□□ 0.49
SMC6-206ENST00000446852 QKIQ96PU8 341 aaKnown RBP eCLIP18.09■□□□□ 0.493e-12■■■■□ 22.8
SMC6-206ENST00000446852 TSEN34Q9BSV6 310 aaKnown RBP18.09■□□□□ 0.49
SMC6-206ENST00000446852 WDR6Q9NNW5 1121 aaKnown RBP18.09■□□□□ 0.49
SMC6-206ENST00000446852 INTS9Q9NV88 658 aaKnown RBP18.09■□□□□ 0.49
SMC6-206ENST00000446852 RCOR3Q9P2K3 495 aaPredicted RBP18.09■□□□□ 0.49
SMC6-206ENST00000446852 TTC3P53804 2025 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 TMEM120BA0PK00 339 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 POC1B-GALNT4F8VUJ3 575 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 LTFP02788 710 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 DCLRE1AQ6PJP8 1040 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 IGDCC3Q8IVU1 814 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 RIBC1Q8N443 379 aaPredicted RBP18.08■□□□□ 0.49
SMC6-206ENST00000446852 ATP11CQ8NB49 1132 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 OLFM3Q96PB7 478 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms