RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 C1orf21Q9H246 121 aa16.96■□□□□ 0.31
HDAC11-214ENST00000446613 VCX3BQ9H321 246 aa16.96■□□□□ 0.31
HDAC11-214ENST00000446613 VCX3AQ9NNX9 186 aa16.96■□□□□ 0.31
HDAC11-214ENST00000446613 THAP1Q9NVV9 213 aa16.96■□□□□ 0.31
HDAC11-214ENST00000446613 PCDHGC3Q9UN70 934 aa16.96■□□□□ 0.31
HDAC11-214ENST00000446613 FAM189A1O60320 539 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PABPC4LP0CB38 370 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 FGF3P11487 239 aaPredicted RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 TSHRP16473 764 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 CCND2P30279 289 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 ENPEPQ07075 957 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 CA9Q16790 459 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PABPC1LQ4VXU2 614 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 N4BP2L1Q5TBK1 243 aaPredicted RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 MBLAC2Q68D91 279 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PPP1R2P3Q6NXS1 205 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 ZNF534Q76KX8 674 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 BRSK2Q8IWQ3 736 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PLD5Q8N7P1 536 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PPP1R36Q96LQ0 422 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 XYLT2Q9H1B5 865 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 AK5Q9Y6K8 562 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 HNRNPRO43390 633 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 KRT38O76015 456 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 LDHAP00338 332 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 SRGAP2CP0DJJ0 459 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 IL4RP24394 825 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 SLC1A6P48664 564 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 YWHAEP62258 255 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 GHRHRQ02643 423 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 FOLH1Q04609 750 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 WASHC5Q12768 1159 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 TLR1Q15399 786 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 XKR3Q5GH77 459 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 TMEM192Q8IY95 271 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 ARHGAP18Q8N392 663 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 DEPDC1BQ8WUY9 529 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 TFB1MQ8WVM0 346 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 RPAP3Q9H6T3 665 aaPredicted RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 RSAD1Q9HA92 442 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PNPLA8Q9NP80 782 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 DDX18Q9NVP1 670 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 DNAJB4Q9UDY4 337 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 APOBEC2Q9Y235 224 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 INPP5FQ9Y2H2 1132 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 H0YIN7 160 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 DCXO43602 365 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 ATP6V1B1P15313 513 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 ITGAXP20702 1163 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 POLR2BP30876 1174 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 CRHR1P34998 444 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 SCNN1BP51168 640 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PRKG1Q13976 671 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 C10orf107Q8IVU9 208 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 WDR75Q8IWA0 830 aaKnown RBP16.95■□□□□ 0.3
HDAC11-214ENST00000446613 TRIM42Q8IWZ5 723 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PQLC3Q8N755 202 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 RNPEPQ9H4A4 650 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 ZNF180Q9UJW8 692 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 PSAT1Q9Y617 370 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 COMMD3-BMI1R4GMX3 469 aa16.95■□□□□ 0.3
HDAC11-214ENST00000446613 C15orf38-AP3S2A0A0A6YYH1 394 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 H3BNX3 289 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 WDR46O15213 610 aaKnown RBP16.94■□□□□ 0.3
HDAC11-214ENST00000446613 ZBED1O96006 694 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 ALDOAP04075 364 aaKnown RBP16.94■□□□□ 0.3
HDAC11-214ENST00000446613 NAMPTP43490 491 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 IDH3AP50213 366 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 USP46P62068 366 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 DEUP1Q05D60 604 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 UGT2A3Q6UWM9 527 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 ARPINQ7Z6K5 226 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 SLC7A3Q8WY07 619 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 HIC2Q96JB3 615 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 SIGLEC10Q96LC7 697 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 ADPGKQ9BRR6 497 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 UBAP1Q9NZ09 502 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 CCDC160A6NGH7 325 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 PEX10O60683 326 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 SPAG6O75602 509 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 GJB1P08034 283 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 ARL2P36404 184 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 LGSNQ5TDP6 509 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 WDR49Q8IV35 697 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 NLGN1Q8N2Q7 840 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 GPRASP2Q96D09 838 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 PGBD4Q96DM1 585 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 PHF12Q96QT6 1004 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 DHX33Q9H6R0 707 aaKnown RBP16.94■□□□□ 0.3
HDAC11-214ENST00000446613 ZDHHC7Q9NXF8 308 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 FZD1Q9UP38 647 aa16.94■□□□□ 0.3
HDAC11-214ENST00000446613 E9PBE3 544 aa16.93■□□□□ 0.3
HDAC11-214ENST00000446613 M0QYV0 167 aa16.93■□□□□ 0.3
HDAC11-214ENST00000446613 TPP1O14773 563 aa16.93■□□□□ 0.3
HDAC11-214ENST00000446613 CREB3O43889 395 aa16.93■□□□□ 0.3
HDAC11-214ENST00000446613 CCNT2O60583 730 aaKnown RBP16.93■□□□□ 0.3
HDAC11-214ENST00000446613 KLHL41O60662 606 aa16.93■□□□□ 0.3
HDAC11-214ENST00000446613 SMIM18P0DKX4 95 aa16.93■□□□□ 0.3
HDAC11-214ENST00000446613 TBL3Q12788 808 aaKnown RBP16.93■□□□□ 0.3
HDAC11-214ENST00000446613 KRT81Q14533 505 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms