RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 RNF34Q969K3 372 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 SERPINB11Q96P15 392 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 CORO1BQ9BR76 489 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 LRRC3Q9BY71 257 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 NSUN3Q9H649 340 aaKnown RBP9.91□□□□□ -0.82
NPHP1-207ENST00000445609 WDCPQ9H6R7 721 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 L2HGDHQ9H9P8 463 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 IL21Q9HBE4 155 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 WDR6Q9NNW5 1121 aaKnown RBP9.91□□□□□ -0.82
NPHP1-207ENST00000445609 ASAH2Q9NR71 780 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 MARCH2Q9P0N8 246 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 RNF14Q9UBS8 474 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 TMEM265A0A087WTH1 108 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 MDM4O15151 490 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 IRAK2O43187 625 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 TADA3O75528 432 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 KRT1P04264 644 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 PTPN2P17706 415 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 ATP5C1P36542 298 aaKnown RBP9.91□□□□□ -0.82
NPHP1-207ENST00000445609 TUBP50607 506 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 WHAMMP3Q1A5X7 153 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 KLHDC10Q6PID8 442 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 TMC8Q8IU68 726 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 CREG2Q8IUH2 290 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 KCTD6Q8NC69 237 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 HSPH1Q92598 858 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 RBM41Q96IZ5 413 aaKnown RBP9.91□□□□□ -0.82
NPHP1-207ENST00000445609 CAPZA3Q96KX2 299 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 NACA2Q9H009 215 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 DNMT3LQ9UJW3 386 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 LAMA3Q16787 3333 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 CCDC195A0A1B0GUA6 201 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 LRRD1A4D1F6 860 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 MSI1O43347 362 aaKnown RBP9.9□□□□□ -0.82
NPHP1-207ENST00000445609 FGF19O95750 216 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 POU2F2P09086 479 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 GABRR2P28476 465 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 CDC25CP30307 473 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 CCR1P32246 355 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 ADRA1BP35368 520 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 CETN2P41208 172 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 AIF1P55008 147 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 RBM10P98175 930 aaKnown RBP9.9□□□□□ -0.82
NPHP1-207ENST00000445609 NNTQ13423 1086 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 KCNC3Q14003 757 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 ARL13BQ3SXY8 428 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 SEL1L2Q5TEA6 688 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 ZNF697Q5TEC3 545 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 CCDC181Q5TID7 509 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 GAREM2Q75VX8 874 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 MIB1Q86YT6 1006 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 PSTKQ8IV42 348 aaKnown RBP9.9□□□□□ -0.82
NPHP1-207ENST00000445609 CCDC50Q8IVM0 306 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 CCDC185Q8N715 623 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 RAPGEF5Q92565 580 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 NTAN1Q96AB6 310 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.82
NPHP1-207ENST00000445609 ACSF2Q96CM8 615 aaPredicted RBP9.9□□□□□ -0.82
NPHP1-207ENST00000445609 MS4A14Q96JA4 679 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 SNRNP25Q9BV90 132 aaKnown RBP9.9□□□□□ -0.82
NPHP1-207ENST00000445609 IGFLR1Q9H665 355 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.9□□□□□ -0.82
NPHP1-207ENST00000445609 KLHL11Q9NVR0 708 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 LMCD1Q9NZU5 365 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 TLR6Q9Y2C9 796 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 PDE4DIPQ5VU43 2346 aa9.9□□□□□ -0.82
NPHP1-207ENST00000445609 COL4A4P53420 1690 aaPredicted RBP9.9□□□□□ -0.83
NPHP1-207ENST00000445609 PI4K2BG5E9Z4 385 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 COCHO43405 550 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 SLC2A3P11169 496 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 MYL4P12829 197 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 KDELR1P24390 212 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 GTF2F1P35269 517 aaKnown RBP eCLIP9.9□□□□□ -0.83
NPHP1-207ENST00000445609 PAFAH1B1P43034 410 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 KPNA1P52294 538 aaPredicted RBP9.9□□□□□ -0.83
NPHP1-207ENST00000445609 EPHA5P54756 1037 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 BRMS1LQ5PSV4 323 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 MAP7D3Q8IWC1 876 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 RASGEF1CQ8N431 466 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 LEMD2Q8NC56 503 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 VN1R2Q8NFZ6 395 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 ACTRT1Q8TDG2 376 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 MRPS31Q92665 395 aaKnown RBP9.9□□□□□ -0.83
NPHP1-207ENST00000445609 GCNAQ96QF7 691 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 PRDM12Q9H4Q4 367 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.9□□□□□ -0.83
NPHP1-207ENST00000445609 HCFC1R1Q9NWW0 138 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 DNMT3BQ9UBC3 853 aaKnown RBP9.9□□□□□ -0.83
NPHP1-207ENST00000445609 RASAL2Q9UJF2 1139 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 TTC7AQ9ULT0 858 aaPredicted RBP9.9□□□□□ -0.83
NPHP1-207ENST00000445609 FZD10Q9ULW2 581 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 AP4E1Q9UPM8 1137 aa9.9□□□□□ -0.83
NPHP1-207ENST00000445609 SLC12A8A0AV02 714 aa9.89□□□□□ -0.83
NPHP1-207ENST00000445609 C2orf78A6NCI8 922 aa9.89□□□□□ -0.83
NPHP1-207ENST00000445609 OAS1P00973 400 aaKnown RBP9.89□□□□□ -0.83
NPHP1-207ENST00000445609 RHOP08100 348 aa9.89□□□□□ -0.83
NPHP1-207ENST00000445609 CDH6P55285 790 aa9.89□□□□□ -0.83
NPHP1-207ENST00000445609 TBX4P57082 545 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms