RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ACOT9Q9Y305 439 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 SLC4A7Q9Y6M7 1214 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 A0A1W2PPM1 405 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 E9PBE3 544 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 AKAP10O43572 662 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 KLHL41O60662 606 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 STMN1P16949 149 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 AMPD1P23109 780 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 C15orf59Q2T9L4 293 aaPredicted RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 AGAP9Q5VTM2 703 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 DEFB107AQ8IZN7 70 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 MIEF2Q96C03 454 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 SPON2Q9BUD6 331 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 LHX5Q9H2C1 402 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 IARS2Q9NSE4 1012 aaKnown RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 MYH7P12883 1935 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 BANF1O75531 89 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 RASSF9O75901 435 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 EEF1DP29692 281 aaKnown RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 PDCD2Q16342 344 aaPredicted RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 UNC45BQ8IWX7 931 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 URGCPQ8TCY9 931 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 TCF7L2Q9NQB0 619 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 TRIM13O60858 407 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 KCNA4P22459 653 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 PDAP1Q13442 181 aaKnown RBP17.13■□□□□ 0.33
TCOF1-206ENST00000445265 SPANXN3Q5MJ09 141 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
TCOF1-206ENST00000445265 MGRN1O60291 552 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 MGAT1P26572 445 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 ATXN3P54252 364 aaPredicted RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 TBL3Q12788 808 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 PCSK7Q16549 785 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 NPNTQ6UXI9 565 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 TDRPQ86YL5 185 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 FITM2Q8N6M3 262 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 ZSWIM2Q8NEG5 633 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 PDCD6IPQ8WUM4 868 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 SGF29Q96ES7 293 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 CPNE1Q99829 537 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 RUVBL2Q9Y230 463 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 RNF103O00237 685 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 E2F6O75461 281 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 YWHAZP63104 245 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 PIWIL2Q8TC59 973 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 RMDN1Q96DB5 314 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 ZNF184Q99676 751 aaPredicted RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 CDT1Q9H211 546 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 WRAP73Q9P2S5 460 aaPredicted RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 MYH10P35580 1976 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 PMPCBO75439 489 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 RIOX2Q8IUF8 465 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 TDRD5Q8NAT2 981 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 FNIP1Q8TF40 1166 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 NCLNQ969V3 563 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 BRD8Q9H0E9 1235 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 TCRBV9S1A1TA0A576 114 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 CYB561D2O14569 222 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 UNGP13051 313 aaPredicted RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 PTDSS1P48651 473 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 BST1Q10588 318 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 TMEM132BQ14DG7 1078 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 MRPL46Q9H2W6 279 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 SARS2Q9NP81 518 aaKnown RBP17.12■□□□□ 0.33
TCOF1-206ENST00000445265 NCKIPSDQ9NZQ3 722 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 TJP2Q9UDY2 1190 aa17.12■□□□□ 0.33
TCOF1-206ENST00000445265 ATRNL1Q5VV63 1379 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 FAM237BA0A1B0GVD1 139 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 JCHAINP01591 159 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 PRKAA2P54646 552 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 DRICH1Q6PGQ1 229 aaPredicted RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 ARCQ7LC44 396 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 CLEC4DQ8WXI8 215 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 ULK4Q96C45 1275 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 P2RX7Q99572 595 aaKnown RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 GID8Q9NWU2 228 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 SNTG2Q9NY99 539 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 WARS2Q9UGM6 360 aaKnown RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 MCM8Q9UJA3 840 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 N4BP2Q86UW6 1770 aaPredicted RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 ENTPD5O75356 428 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 NFICP08651 508 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 ADSSP30520 456 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 ZCCHC23Q6ZST2 131 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 LRRC43Q8N309 656 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 H0YGN5 161 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 SKAP2O75563 359 aaPredicted RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 TCEA3O75764 348 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 PRKAA1Q13131 559 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 MAPRE1Q15691 268 aaKnown RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 SLC25A41Q8N5S1 370 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 KYQ8NBH2 561 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 PARK7Q99497 189 aaKnown RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 APOL2Q9BQE5 337 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms