RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 ARID5AQ03989 594 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 RING1Q06587 406 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 TNK2Q07912 1038 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 DHCR24Q15392 516 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 TRIP4Q15650 581 aaPredicted RBP12.79□□□□□ -0.36
LTBR-204ENST00000444814 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
LTBR-204ENST00000444814 SND1Q7KZF4 910 aaKnown RBP eCLIP12.79□□□□□ -0.36
LTBR-204ENST00000444814 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
LTBR-204ENST00000444814 ADGRG2Q8IZP9 1017 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 EDEM1Q92611 657 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 CD101Q93033 1021 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
LTBR-204ENST00000444814 ACP6Q9NPH0 428 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 HPS4Q9NQG7 708 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 IFNKQ9P0W0 207 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 MYO10Q9HD67 2058 aa12.79□□□□□ -0.36
LTBR-204ENST00000444814 ITIH6Q6UXX5 1313 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 A0A1W2PQJ5 194 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 PIK3R2O00459 728 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 TRDMT1O14717 391 aaKnown RBP12.78□□□□□ -0.36
LTBR-204ENST00000444814 TEX33O43247 280 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 STC2O76061 302 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 CALCAP01258 141 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 CALB1P05937 261 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 PNMA6AP0CW24 399 aaPredicted RBP12.78□□□□□ -0.36
LTBR-204ENST00000444814 TNFAIP3P21580 790 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 CORO1AP31146 461 aaKnown RBP12.78□□□□□ -0.36
LTBR-204ENST00000444814 GJA4P35212 333 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 PTPN5P54829 565 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 TBX4P57082 545 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 SLC6A3Q01959 620 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 ANO4Q32M45 955 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 ACBD5Q5T8D3 534 aaPredicted RBP12.78□□□□□ -0.36
LTBR-204ENST00000444814 TRIM68Q6AZZ1 485 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 SLC26A9Q7LBE3 791 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 CCDC105Q8IYK2 499 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 CPXM1Q96SM3 734 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 SPHK2Q9NRA0 654 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 NUDT5Q9UKK9 219 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 TLR6Q9Y2C9 796 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 DENND4CQ5VZ89 1909 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 OBSL1O75147 1896 aa12.78□□□□□ -0.36
LTBR-204ENST00000444814 IRAK2O43187 625 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 HOXC11O43248 304 aaPredicted RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 PAPSS1O43252 624 aaPredicted RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 LAMTOR5O43504 91 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 F9P00740 461 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 PDGFBP01127 241 aaPredicted RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 APODP05090 189 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 HMBSP08397 361 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 MMEP08473 750 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 GABRB2P47870 512 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 NAA35Q5VZE5 725 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 BBS7Q8IWZ6 715 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 CPXM2Q8N436 756 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 DTWD2Q8NBA8 298 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 TTC8Q8TAM2 541 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 DDX1Q92499 740 aaKnown RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 SYN2Q92777 582 aaPredicted RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 RNF34Q969K3 372 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 AZIN2Q96A70 460 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 CLDN23Q96B33 292 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 PNKPQ96T60 521 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 AGPAT1Q99943 283 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 FOXQ1Q9C009 403 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 LINC00597Q9H2U6 94 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.36
LTBR-204ENST00000444814 ZNHIT6Q9NWK9 470 aaKnown RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 NOCTQ9UK39 431 aaKnown RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 LUC7L2Q9Y383 392 aaKnown RBP12.77□□□□□ -0.36
LTBR-204ENST00000444814 MYO16Q9Y6X6 1858 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 ZNF638Q14966 1978 aaKnown RBP12.77□□□□□ -0.37
LTBR-204ENST00000444814 MDM4O15151 490 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 EPHB6O15197 1021 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 DAB1O75553 588 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 CYP17A1P05093 508 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 ABCB4P21439 1286 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 NOS2P35228 1153 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 CCR3P51677 355 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 NOMO3P69849 1222 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 ZBED6P86452 979 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 KLHL30Q0D2K2 578 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 PON2Q15165 354 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 MPPE1Q53F39 396 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 LY6G5CQ5SRR4 150 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.37
LTBR-204ENST00000444814 BHLHA9Q7RTU4 235 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 ATP6V0D2Q8N8Y2 350 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 RNF214Q8ND24 703 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 ACDQ96AP0 544 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 TRIM11Q96F44 468 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 BBS2Q9BXC9 721 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 LMAN1LQ9HAT1 526 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 SPATA6Q9NWH7 488 aaPredicted RBP12.77□□□□□ -0.37
LTBR-204ENST00000444814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.77□□□□□ -0.37
LTBR-204ENST00000444814 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 MARK1Q9P0L2 795 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms