RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 AGO1Q9UL18 857 aaKnown RBP11.4□□□□□ -0.58
SF3A1-203ENST00000444440 CLEC4EQ9ULY5 219 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.4□□□□□ -0.58
SF3A1-203ENST00000444440 DOCK4Q8N1I0 1966 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 PCDH15Q96QU1 1955 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 SLC12A8A0AV02 714 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 BECN2A8MW95 431 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 M0QYV0 167 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 MSI1O43347 362 aaKnown RBP11.39□□□□□ -0.59
SF3A1-203ENST00000444440 EPN2O95208 641 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 PAEPP09466 180 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 LCP1P13796 627 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 SLC9A1P19634 815 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 WASP42768 502 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 TNFRSF4P43489 277 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 YWHAEP62258 255 aaKnown RBP11.39□□□□□ -0.59
SF3A1-203ENST00000444440 GCNT1Q02742 428 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 SF3A2Q15428 464 aaKnown RBP11.39□□□□□ -0.59
SF3A1-203ENST00000444440 CNGA2Q16280 664 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 DPCR1Q3MIW9 517 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 C10orf76Q5T2E6 689 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 BSPRYQ5W0U4 402 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 BTBD8Q5XKL5 378 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 PRR23CQ6ZRP0 262 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 CLEC17AQ6ZS10 378 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 CACNA2D4Q7Z3S7 1137 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 DENND1CQ8IV53 801 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 FMNL3Q8IVF7 1028 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 WDFY3Q8IZQ1 3526 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 TSTD1Q8NFU3 115 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 RLN3Q8WXF3 142 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 KCTD13Q8WZ19 329 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 CD248Q9HCU0 757 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 MARCH2Q9P0N8 246 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 DEC1Q9P2X7 70 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 HESX1Q9UBX0 185 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 CYTH4Q9UIA0 394 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 LSM7Q9UK45 103 aaKnown RBP11.39□□□□□ -0.59
SF3A1-203ENST00000444440 FBXO10Q9UK96 956 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 CNTN6Q9UQ52 1028 aa11.39□□□□□ -0.59
SF3A1-203ENST00000444440 A0A1W2PQF6 199 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 MED19A0JLT2 244 aaPredicted RBP11.38□□□□□ -0.59
SF3A1-203ENST00000444440 TBC1D3BA6NDS4 549 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.38□□□□□ -0.59
SF3A1-203ENST00000444440 GOLGA6L22H0YM25 854 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 GNA14O95837 355 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 PENKP01210 267 aaPredicted RBP11.38□□□□□ -0.59
SF3A1-203ENST00000444440 FYNP06241 537 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 SETSIPP0DME0 302 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 SGSHP51688 502 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 GOLGA8FQ08AF8 430 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 GOLGA8DPQ0D2H9 430 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 TRIP4Q15650 581 aaPredicted RBP11.38□□□□□ -0.59
SF3A1-203ENST00000444440 CSRP2Q16527 193 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 GRAMD4Q6IC98 578 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 KIAA1211LQ6NV74 962 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 DPY19L2P1Q6NXN4 242 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 DENND1BQ6P3S1 775 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 TRIM65Q6PJ69 517 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 FAM217AQ8IXS0 508 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 ZNF513Q8N8E2 541 aaPredicted RBP11.38□□□□□ -0.59
SF3A1-203ENST00000444440 OLIG1Q8TAK6 271 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 ZC3H10Q96K80 434 aaKnown RBP11.38□□□□□ -0.59
SF3A1-203ENST00000444440 DNAI2Q9GZS0 605 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 SLC6A17Q9H1V8 727 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 LRRC4Q9HBW1 653 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 SIX2Q9NPC8 291 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 UBE2TQ9NPD8 197 aaPredicted RBP11.38□□□□□ -0.59
SF3A1-203ENST00000444440 CD93Q9NPY3 652 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 LMBRD1Q9NUN5 540 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 TJP2Q9UDY2 1190 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 DOCK9Q9BZ29 2069 aa11.38□□□□□ -0.59
SF3A1-203ENST00000444440 ASCC3Q8N3C0 2202 aaKnown RBP11.37□□□□□ -0.59
SF3A1-203ENST00000444440 SPTBN2O15020 2390 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 TCRBV21S2A2A0A5A6 115 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 WASH3PC4AMC7 463 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 GFRA2O00451 464 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 PNMA6AP0CW24 399 aaPredicted RBP11.37□□□□□ -0.59
SF3A1-203ENST00000444440 GPD2P43304 727 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 DGKGP49619 791 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 ATXN1P54253 815 aaKnown RBP11.37□□□□□ -0.59
SF3A1-203ENST00000444440 COG7P83436 770 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 GEN1Q17RS7 908 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 HSP90AA4PQ58FG1 418 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 TMEM215Q68D42 235 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 TCEAL6Q6IPX3 200 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 RSRC2Q7L4I2 434 aaKnown RBP11.37□□□□□ -0.59
SF3A1-203ENST00000444440 CREBRFQ8IUR6 639 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 SIX6OS1Q8N1H7 587 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 SCML4Q8N228 414 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 ARHGAP18Q8N392 663 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 TCEAL3Q969E4 200 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 PIWIL1Q96J94 861 aaKnown RBP11.37□□□□□ -0.59
SF3A1-203ENST00000444440 CNGB3Q9NQW8 809 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 WDR35Q9P2L0 1181 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 MBD1Q9UIS9 605 aaPredicted RBP11.37□□□□□ -0.59
SF3A1-203ENST00000444440 KIAA1257Q9ULG3 409 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 STARD13Q9Y3M8 1113 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 RAD54BQ9Y620 910 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms