RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ARL4CP56559 192 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 BCAR1P56945 870 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 CAP1Q01518 475 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 OTUD4Q01804 1114 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DSG1Q02413 1049 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 UBE3AQ05086 875 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RNASELQ05823 741 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DEUP1Q05D60 604 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DHX9Q08211 1270 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PPIDQ08752 370 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TRIM32Q13049 653 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PLD1Q13393 1074 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SEMA5AQ13591 1074 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 LAMB3Q13751 1172 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RAB33AQ14088 237 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 GPNMBQ14956 572 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TERF2Q15554 542 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PTPROQ16827 1216 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PARP6Q2NL67 630 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 KLHL38Q2WGJ6 581 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ANO4Q32M45 955 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PABPC1LQ4VXU2 614 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DCAF6Q58WW2 860 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SLC45A4Q5BKX6 768 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RALGPS1Q5JS13 557 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 GLRA4Q5JXX5 417 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 CLLU1OSQ5K130 101 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 STXBP5Q5T5C0 1151 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RNASEH2BQ5TBB1 312 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 LGSNQ5TDP6 509 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TTC39BQ5VTQ0 682 aaPredicted RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DENND2CQ68D51 928 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PDE12Q6L8Q7 609 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TIGD7Q6NT04 549 aaPredicted RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TTC27Q6P3X3 843 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZDHHC24Q6UX98 284 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SCARA5Q6ZMJ2 495 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF783Q6ZMS7 281 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 KDM7AQ6ZMT4 941 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DENND5BQ6ZUT9 1274 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 BHLHA9Q7RTU4 235 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 CCDC91Q7Z6B0 441 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 NECAB2Q7Z6G3 386 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 LINC00523Q86TU6 105 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 METTL3Q86U44 580 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 OSTM1Q86WC4 334 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SPATA2LQ8IUW3 424 aaPredicted RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 LMNTD2Q8IXW0 634 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DEFB106AQ8N104 65 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TMEM199Q8N511 208 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PLD5Q8N7P1 536 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF557Q8N988 423 aaPredicted RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 NAT8LQ8N9F0 302 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 LEMD2Q8NC56 503 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 C3orf58Q8NDZ4 430 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZMIZ2Q8NF64 920 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DBF4BQ8NFT6 615 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 JOSD2Q8TAC2 188 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF461Q8TAF7 563 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 GABPB2Q8TAK5 448 aaPredicted RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 FAM76AQ8TAV0 307 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PTCD2Q8WV60 388 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 LINC01599Q8WXQ3 324 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 IFT81Q8WYA0 676 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RAPGEF5Q92565 580 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DPF3Q92784 378 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 LENG1Q96BZ8 264 aaPredicted RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TLCD1Q96CP7 247 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 HDAC11Q96DB2 347 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZBTB10Q96DT7 871 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SLC39A13Q96H72 371 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SGSM3Q96HU1 749 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF599Q96NL3 588 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SAMD11Q96NU1 681 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 CASD1Q96PB1 797 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZIM3Q96PE6 472 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 CSPG4P5Q96PW8 444 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PSMB7Q99436 277 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SMOQ99835 787 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 DDX50Q9BQ39 737 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RTP3Q9BQQ7 232 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PLCD4Q9BRC7 762 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SNRNP25Q9BV90 132 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 AP1M1Q9BXS5 423 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RHOBTB2Q9BYZ6 727 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 KLC2Q9H0B6 622 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RNF208Q9H0X6 261 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ADAM7Q9H2U9 754 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 HIPK3Q9H422 1215 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 GOLPH3Q9H4A6 298 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 CCDC134Q9H6E4 229 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 WDCPQ9H6R7 721 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 CATSPERBQ9H7T0 1116 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 NRDE2Q9H7Z3 1164 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RC3H2Q9HBD1 1191 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 USP29Q9HBJ7 922 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TMBIM4Q9HC24 238 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 PCDH18Q9HCL0 1135 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 WDR6Q9NNW5 1121 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 NGRNQ9NPE2 291 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms