RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 NAA35Q5VZE5 725 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 CWF19L1Q69YN2 538 aaKnown RBP11.31□□□□□ -0.6
HDAC6-211ENST00000443563 SPECC1LQ69YQ0 1117 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 SARM1Q6SZW1 724 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 OLFML1Q6UWY5 402 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 FAM183BPQ6ZVS7 135 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 SLC26A9Q7LBE3 791 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 TTC8Q8TAM2 541 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 CPA5Q8WXQ8 436 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 SYN2Q92777 582 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-211ENST00000443563 PRRX2Q99811 253 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 LINC00597Q9H2U6 94 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 SEPT11Q9NVA2 429 aaKnown RBP11.31□□□□□ -0.6
HDAC6-211ENST00000443563 WDR35Q9P2L0 1181 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 KMT2EQ8IZD2 1858 aa11.31□□□□□ -0.6
HDAC6-211ENST00000443563 FAM170BA6NMN3 283 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 CALB1P05937 261 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 FYNP06241 537 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 HMBSP08397 361 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 ADH5P11766 374 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 UNGP13051 313 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-211ENST00000443563 MMP8P22894 467 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 AVPR2P30518 371 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 CORO1AP31146 461 aaKnown RBP11.3□□□□□ -0.6
HDAC6-211ENST00000443563 GJA4P35212 333 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 NOS2P35228 1153 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 EIF2DP41214 584 aaKnown RBP11.3□□□□□ -0.6
HDAC6-211ENST00000443563 PRKCIP41743 596 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 TBX4P57082 545 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 CDK17Q00537 523 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 CENPCQ03188 943 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 GAD2Q05329 585 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 KLHL30Q0D2K2 578 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 MTA1Q13330 715 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 DHCR24Q15392 516 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 DCAF6Q58WW2 860 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 DGKKQ5KSL6 1271 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 IER5LQ5T953 404 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 FAM102AQ5T9C2 384 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-211ENST00000443563 NUGGCQ68CJ6 796 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 Q6ZNB5 142 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 BBS7Q8IWZ6 715 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 CCDC26Q8TAB7 109 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 DQX1Q8TE96 717 aaKnown RBP11.3□□□□□ -0.6
HDAC6-211ENST00000443563 SLC2A13Q96QE2 648 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 FOXQ1Q9C009 403 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 KCNH6Q9H252 994 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 SPHK2Q9NRA0 654 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 TJP2Q9UDY2 1190 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 SFMBT1Q9UHJ3 866 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 NAALADL1Q9UQQ1 740 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 TLR6Q9Y2C9 796 aa11.3□□□□□ -0.6
HDAC6-211ENST00000443563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 TRDMT1O14717 391 aaKnown RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 GREM1O60565 184 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 DAB1O75553 588 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 APOEP02649 317 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 CYBBP04839 570 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 CYP17A1P05093 508 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 SLC2A3P11169 496 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 DRD1P21728 446 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 CD72P21854 359 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 RPS9P46781 194 aaKnown RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 SOX9P48436 509 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 SLC11A2P49281 568 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 GRSF1Q12849 480 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 LY6G5CQ5SRR4 150 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 RHBDF2Q6PJF5 856 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 NUDT18Q6ZVK8 323 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 ARCQ7LC44 396 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 PHF13Q86YI8 300 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 DENND1CQ8IV53 801 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 DEFB106AQ8N104 65 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 SYNPOQ8N3V7 929 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 CPXM2Q8N436 756 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 CPLX3Q8WVH0 158 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 CD101Q93033 1021 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 AZIN2Q96A70 460 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 VCPIP1Q96JH7 1222 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 P2RY13Q9BPV8 354 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 DDX50Q9BQ39 737 aaKnown RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 IER2Q9BTL4 223 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 TRIM5Q9C035 493 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 HAUS4Q9H6D7 363 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 ADAM22Q9P0K1 906 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 SLC12A6Q9UHW9 1150 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 AGO1Q9UL18 857 aaKnown RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 STAP1Q9ULZ2 295 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 NDRG2Q9UN36 371 aaKnown RBP11.29□□□□□ -0.6
HDAC6-211ENST00000443563 PAXBP1Q9Y5B6 917 aa11.29□□□□□ -0.6
HDAC6-211ENST00000443563 KIAA1549LQ6ZVL6 1849 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 COL4A3Q01955 1670 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms