RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SKILP12757 684 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 FERP16591 822 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 MMP8P22894 467 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 HOXC13P31276 330 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 IFNAR2P48551 515 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 MLLT6P55198 1093 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 TPM4P67936 248 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 PDGFRLQ15198 375 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 DHCR24Q15392 516 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 LY6G5CQ5SRR4 150 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 ASTLQ6HA08 431 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 FSTL4Q6MZW2 842 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 PKN3Q6P5Z2 889 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 MMS22LQ6ZRQ5 1243 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 MON1BQ7L1V2 547 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 BEND5Q7L4P6 421 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 CACNA2D4Q7Z3S7 1137 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 BNIPLQ7Z465 357 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 DDX42Q86XP3 938 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 TMEM25Q86YD3 366 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 VSTM4Q8IW00 320 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 ETFBKMTQ8IXQ9 262 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 AGPAT1Q99943 283 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 ANLNQ9NQW6 1124 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 RBM12Q9NTZ6 932 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 ASNSD1Q9NWL6 643 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 C2orf42Q9NWW7 574 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 THG1LQ9NWX6 298 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 XPO7Q9UIA9 1087 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 TMEM59LQ9UK28 342 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 AGO1Q9UL18 857 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 CAPN11Q9UMQ6 739 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 NENFQ9UMX5 172 aa13.42□□□□□ -0.26
PDLIM2-212ENST00000443561 MYO18AQ92614 2054 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 TRIM24O15164 1050 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 IRAK2O43187 625 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 DAB1O75553 588 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 DCNP07585 359 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 CHRNB1P11230 501 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 NCAM1P13591 858 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 AVPR2P30518 371 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 CORO1AP31146 461 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 FLT3P36888 993 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 SGSHP51688 502 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 SLC6A3Q01959 620 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 ARID5BQ14865 1188 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 PON2Q15165 354 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 OR6B2Q6IFH4 312 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 WDR59Q6PJI9 974 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 PHLDB2Q86SQ0 1253 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 DEFB106AQ8N104 65 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 JOSD2Q8TAC2 188 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 ATP2A3Q93084 1043 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 FAM149B1Q96BN6 582 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 C11orf70Q9BRQ4 267 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 EDEM3Q9BZQ6 932 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 HAUS4Q9H6D7 363 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 HCN2Q9UL51 889 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 SH3BP1Q9Y3L3 701 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 DOCK4Q8N1I0 1966 aa13.41□□□□□ -0.26
PDLIM2-212ENST00000443561 MUC6Q6W4X9 2439 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 SLC6A4P31645 630 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 CASP14P31944 242 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 SCNN1AP37088 669 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 SLC6A11P48066 632 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 CLCN5P51795 746 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 GSCP56915 257 aaPredicted RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 YWHAZP63104 245 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 TBX2Q13207 712 aaPredicted RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 CCINQ13939 588 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 ASIC2Q16515 512 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 FAM133BQ5BKY9 247 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 TMEM196Q5HYL7 178 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 RNF43Q68DV7 783 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 Q6ZS52 159 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 RSRC2Q7L4I2 434 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 RALGPS2Q86X27 583 aaPredicted RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 PHF13Q86YI8 300 aaPredicted RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 PRSS33Q8NF86 280 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 CSGALNACT1Q8TDX6 532 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 FAM3CQ92520 227 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 NT5C3BQ969T7 300 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 CLDN23Q96B33 292 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 PLD4Q96BZ4 506 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 CDK5RAP1Q96SZ6 601 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 NPY6RQ99463 290 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 NACA2Q9H009 215 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 C8orf33Q9H7E9 229 aaPredicted RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 POPDC2Q9HBU9 364 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 OLA1Q9NTK5 396 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 STOML2Q9UJZ1 356 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 CLEC4EQ9ULY5 219 aa13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 NDRG2Q9UN36 371 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 HBS1LQ9Y450 684 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-212ENST00000443561 GOLGA6L7A0A1B0GV03 622 aa13.39□□□□□ -0.27
PDLIM2-212ENST00000443561 FAM170BA6NMN3 283 aa13.39□□□□□ -0.27
PDLIM2-212ENST00000443561 TRDMT1O14717 391 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-212ENST00000443561 HOXC11O43248 304 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms