RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PICK1Q9NRD5 415 aa20.98■□□□□ 0.95
SHOX2-203ENST00000441443 COQ9O75208 318 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 STAM2O75886 525 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 HNRNPCP07910 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
SHOX2-203ENST00000441443 FAM163BP0C2L3 166 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 KCNJ11Q14654 390 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 CNGA3Q16281 694 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 LGSNQ5TDP6 509 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 TRMT10BQ6PF06 316 aaKnown RBP20.97■□□□□ 0.95
SHOX2-203ENST00000441443 ADGRF2Q8IZF7 708 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 HMX2A2RU54 273 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 KLHL2O95198 593 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 MAP3K6O95382 1288 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 MAGEA8P43361 318 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 FKBP1CQ5VVH2 108 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 ATG14Q6ZNE5 492 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 MAVSQ7Z434 540 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 MAP7D3Q8IWC1 876 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 PRPF31Q8WWY3 499 aaKnown RBP20.97■□□□□ 0.95
SHOX2-203ENST00000441443 RBM38Q9H0Z9 239 aaKnown RBP20.97■□□□□ 0.95
SHOX2-203ENST00000441443 PNPOQ9NVS9 261 aa20.97■□□□□ 0.95
SHOX2-203ENST00000441443 HMGCS2P54868 508 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 CYLC2Q14093 348 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 OGFRL1Q5TC84 451 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 KBTBD6Q86V97 674 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 PHTF2Q8N3S3 785 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 MARVELD2Q8N4S9 558 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 CCDC33Q8N5R6 958 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 TFB1MQ8WVM0 346 aaKnown RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 RNF146Q9NTX7 359 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 CIDEBQ9UHD4 219 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 CASQ2O14958 399 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 SPAG6O75602 509 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 FBXW8Q8N3Y1 598 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 TMEM35BQ8NCS4 154 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 GAB3Q8WWW8 586 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 NTPCRQ9BSD7 190 aaKnown RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 XPNPEP1Q9NQW7 623 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 RBAKQ9NYW8 714 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 HACL1Q9UJ83 578 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 SORCS3Q9UPU3 1222 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 COL2A1P02458 1487 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 MAGEA10P43363 369 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 CLDN10P78369 228 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 COG7P83436 770 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 ROR1Q01973 937 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 DBN1Q16643 649 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 SAMD3Q8N6K7 520 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 TEPSINQ96N21 525 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 PDCD2LQ9BRP1 358 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 MRPL1Q9BYD6 325 aaKnown RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 SENP6Q9GZR1 1112 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 HAPLN2Q9GZV7 340 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 POPDC2Q9HBU9 364 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 PGAP2Q9UHJ9 254 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 AGO2Q9UKV8 859 aaKnown RBP20.96■□□□□ 0.95
SHOX2-203ENST00000441443 ITGA11Q9UKX5 1188 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 UBIAD1Q9Y5Z9 338 aa20.96■□□□□ 0.95
SHOX2-203ENST00000441443 APOC4-APOC2K7ER74 178 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 PEX10O60683 326 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 KRT38O76015 456 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 CRTAMO95727 393 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 APOC2P02655 101 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 KRT7P08729 469 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 SRGAP2CP0DJJ0 459 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 SETSIPP0DME0 302 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 SRGAP2BP0DMP2 458 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 MSX2P35548 267 aaPredicted RBP20.95■□□□□ 0.94
SHOX2-203ENST00000441443 SLC1A6P48664 564 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 MYBPC1Q00872 1141 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 CDK18Q07002 472 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 TEDDM1Q5T9Z0 273 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 HEMK1Q9Y5R4 338 aaPredicted RBP20.95■□□□□ 0.94
SHOX2-203ENST00000441443 AP4B1Q9Y6B7 739 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 H3BSA7 217 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 H7C0C1 242 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 PLA2G6O60733 806 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 TRPA1O75762 1119 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 KRT3P12035 628 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 SLC5A2P31639 672 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 ATP5OP48047 213 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 GMPSP49915 693 aaPredicted RBP20.95■□□□□ 0.94
SHOX2-203ENST00000441443 PDPK2PQ6A1A2 396 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 SNRNP48Q6IEG0 339 aaKnown RBP20.95■□□□□ 0.94
SHOX2-203ENST00000441443 PQLC1Q8N2U9 271 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 NIPA2Q8N8Q9 360 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 PNPLA8Q9NP80 782 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 ZNF180Q9UJW8 692 aa20.95■□□□□ 0.94
SHOX2-203ENST00000441443 DENRO43583 198 aaKnown RBP20.94■□□□□ 0.94
SHOX2-203ENST00000441443 STRNO43815 780 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 PEX1O43933 1283 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 CST3P01034 146 aaPredicted RBP20.94■□□□□ 0.94
SHOX2-203ENST00000441443 L1CAMP32004 1257 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 CRHR1P34998 444 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 IDH3AP50213 366 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 EMP3P54852 163 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 HADHQ16836 314 aaKnown RBP20.94■□□□□ 0.94
SHOX2-203ENST00000441443 DALRD3Q5D0E6 543 aaKnown RBP20.94■□□□□ 0.94
SHOX2-203ENST00000441443 TFAP2BQ92481 460 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 LPAR1Q92633 364 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 247.4 ms