RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 FBRSL1Q9HCM7 1045 aaKnown RBP6.34□□□□□ -1.4
PTPRR-204ENST00000440835 CRTAC1Q9NQ79 661 aa6.34□□□□□ -1.4
PTPRR-204ENST00000440835 RMND1Q9NWS8 449 aa6.34□□□□□ -1.4
PTPRR-204ENST00000440835 MSRB2Q9Y3D2 182 aa6.34□□□□□ -1.4
PTPRR-204ENST00000440835 NCOR2Q9Y618 2525 aa6.34□□□□□ -1.4
PTPRR-204ENST00000440835 MAPK13O15264 365 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 MAP3K13O43283 966 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 ZNF883P0CG24 379 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 KIR2DL1P43626 348 aaPredicted RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 CYP24A1Q07973 514 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 TRPC3Q13507 836 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SNRNP35Q16560 246 aaKnown RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 MAP7D1Q3KQU3 841 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 ZC3H12AQ5D1E8 599 aaKnown RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 HTR3DQ70Z44 454 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SLC9A9Q8IVB4 645 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 PHTF2Q8N3S3 785 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 HDDC3Q8N4P3 179 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 B3GALNT2Q8NCR0 500 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 RIN3Q8TB24 985 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 FOXJ1Q92949 421 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 DHX58Q96C10 678 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SAAL1Q96ER3 474 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SMARCD1Q96GM5 515 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 PCED1BQ96HM7 432 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SPOCK3Q9BQ16 436 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 BPIFA3Q9BQP9 254 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 CBWD1Q9BRT8 395 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 DMAP1Q9NPF5 467 aaPredicted RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 ARHGEF4Q9NR80 690 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 DNAAF2Q9NVR5 837 aaKnown RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 LSM7Q9UK45 103 aaKnown RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 PILRBQ9UKJ0 227 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 PCDHA5Q9Y5H7 936 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 CCDC151A5D8V7 595 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 KLHL33A6NCF5 533 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 C2orf78A6NCI8 922 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 TISP43B9A030 160 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SMAPO00193 183 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 CDX4O14627 284 aaPredicted RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 CBFA2T2O43439 604 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 PHACTR2O75167 634 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 KLF8O95600 359 aaPredicted RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 TUBB4AP04350 444 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 IDEP14735 1019 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 HNRNPLP14866 589 aaKnown RBP eCLIP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 BDNFP23560 247 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 ACAT1P24752 427 aaKnown RBP6.33□□□□□ -1.4
PTPRR-204ENST00000440835 OXTRP30559 389 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 NTSR1P30989 418 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 CYP27A1Q02318 531 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SEMA3BQ13214 749 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SYCP2LQ5T4T6 812 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SH3PXD2AQ5TCZ1 1133 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 RHBDF2Q6PJF5 856 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 UNC13DQ70J99 1090 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 ETFBKMTQ8IXQ9 262 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 IL17RCQ8NAC3 791 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 WDR24Q96S15 920 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SLC22A12Q96S37 553 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 DEC1Q9P2X7 70 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 SERTAD1Q9UHV2 236 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 CPQQ9Y646 472 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 ACACBO00763 2458 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 PCDH15Q96QU1 1955 aa6.33□□□□□ -1.4
PTPRR-204ENST00000440835 E9PAM4 449 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 MBL2P11226 248 aaPredicted RBP6.32□□□□□ -1.4
PTPRR-204ENST00000440835 DHPSP49366 369 aaPredicted RBP6.32□□□□□ -1.4
PTPRR-204ENST00000440835 GRIN1Q05586 938 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 GFPT1Q06210 699 aaPredicted RBP6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TAF10Q12962 218 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 MDH1BQ5I0G3 518 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 WDR45BQ5MNZ6 344 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 FAM26FQ5R3K3 315 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 C1QTNF12Q5T7M4 302 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 GRAMD4Q6IC98 578 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TMC6Q7Z403 805 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 CRYBG2Q8N1P7 616 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 GATA6Q92908 595 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 FBXO32Q969P5 355 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 CYP2S1Q96SQ9 504 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 MMS19Q96T76 1030 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 GABRG3Q99928 467 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TMEM121BQ9BXQ6 578 aaPredicted RBP6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TRIM9Q9C026 710 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 DCLK3Q9C098 648 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 LINC00597Q9H2U6 94 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 FBRSQ9HAH7 460 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 CSNK1G1Q9HCP0 422 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TLR8Q9NR97 1041 aaKnown RBP6.32□□□□□ -1.4
PTPRR-204ENST00000440835 SPHK2Q9NRA0 654 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 AGPAT3Q9NRZ7 376 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 CFAP97Q9P2B7 532 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 IMPACTQ9P2X3 320 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 MCM8Q9UJA3 840 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 PCDHGB2Q9Y5G2 931 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 MRFAP1Q9Y605 127 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 CACNG3O60359 315 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 OPHN1O60890 802 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms