RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 PAFAH1B3Q15102 231 aaKnown RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 CDO1Q16878 200 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 SPRED3Q2MJR0 410 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 RAB6CQ53S08 254 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 STXBP5Q5T5C0 1151 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 TTC39BQ5VTQ0 682 aaPredicted RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 HHATQ5VTY9 493 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 SCYL2Q6P3W7 929 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 C1orf228Q6PIY5 440 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 FAM228AQ86W67 206 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 OSTM1Q86WC4 334 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 VPS52Q8N1B4 723 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 LRRC8CQ8TDW0 803 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 FERMT1Q9BQL6 677 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 RAB6CQ9H0N0 254 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ZNF408Q9H9D4 720 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 STAP1Q9ULZ2 295 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 GIT1Q9Y2X7 761 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 TRPV2Q9Y5S1 764 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 A0A1W2PPM1 405 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 FAM159BA6NKW6 160 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 H3BRJ5 948 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 GOLGA8MH3BSY2 632 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 PTGESO14684 152 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 OPHN1O60890 802 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 GRAP2O75791 330 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ALDH1A2O94788 518 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 MT-ND3P03897 115 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 CCDC130P13994 396 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 AKR1A1P14550 325 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 KRT4P19013 534 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 AKAP5P24588 427 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 LMO2P25791 158 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ALDH3A1P30838 453 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ARL4AP40617 200 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ETV4P43268 484 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 MRPS6P82932 125 aaKnown RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 SOX4Q06945 474 aaPredicted RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 PRKD1Q15139 912 aaPredicted RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 SLC1A5Q15758 541 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 FSCN1Q16658 493 aaKnown RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 RAB41Q5JT25 222 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 NCBP2-AS2Q69YL0 99 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 RSPH3Q86UC2 560 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 PIGZQ86VD9 579 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ZC3H18Q86VM9 953 aaKnown RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 IGDCC3Q8IVU1 814 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 TRIM42Q8IWZ5 723 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 GDAP1Q8TB36 358 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 RAB3IL1Q8TBN0 382 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 SLC2A14Q8TDB8 520 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ZNF75CPQ92670 426 aaPredicted RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 APOPT1Q96IL0 206 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 SIGLEC10Q96LC7 697 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 EBNA1BP2Q99848 306 aaKnown RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 MTG1Q9BT17 334 aaPredicted RBP8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 NAT9Q9BTE0 207 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 B3GNT5Q9BYG0 378 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 RNF39Q9H2S5 420 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 C10orf88Q9H8K7 445 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ETNK1Q9HBU6 452 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 CNGB3Q9NQW8 809 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 ABCF3Q9NUQ8 709 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 PHTF1Q9UMS5 762 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 HES2Q9Y543 173 aa8.5□□□□□ -1.05
SPIRE1-204ENST00000440472 TRIP12Q14669 1992 aaPredicted RBP8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 A0A0A0MRY4 1105 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 KBTBD13C9JR72 458 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 C2CD2LO14523 706 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 CYB561D2O14569 222 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 HNRNPCL1O60812 293 aaKnown RBP8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 ZNF623O75123 536 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 DCTN3O75935 186 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 KRT37O76014 449 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 UBOX5O94941 541 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 APOEP02649 317 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 INHBAP08476 426 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 MYL3P08590 195 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 SNRPAP09012 282 aaKnown RBP8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 PSMC4P43686 418 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 NCALDP61601 193 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 TMEM62Q0P6H9 643 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 SLC10A2Q12908 348 aaPredicted RBP8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 PDK1Q15118 436 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 PRAMEF19Q5SWL8 479 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 OTUD1Q5VV17 481 aaPredicted RBP8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 FBXW10Q5XX13 1052 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 CHADLQ6NUI6 762 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 CYB5D1Q6P9G0 228 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 PAQR9Q6ZVX9 377 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 PDZD4Q76G19 769 aaPredicted RBP8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 ASRGL1Q7L266 308 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 LRRC6Q86X45 466 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 RASAL3Q86YV0 1011 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 C7orf31Q8N865 590 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 CCDC63Q8NA47 563 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 TFB1MQ8WVM0 346 aaKnown RBP8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 IRGQQ8WZA9 623 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 SPATA13Q96N96 652 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms