RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 CWC15Q9P013 229 aaKnown RBP15.64■□□□□ 0.09
CPSF7-205ENST00000439958 SF3B1O75533 1304 aaKnown RBP eCLIP15.64■□□□□ 0.097e-6■■■■■ 28.7
CPSF7-205ENST00000439958 EEF2KO00418 725 aaKnown RBP15.64■□□□□ 0.09
CPSF7-205ENST00000439958 CCDC38Q502W7 563 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 ALLCQ8N6M5 410 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 MYO18AQ92614 2054 aaKnown RBP15.64■□□□□ 0.09
CPSF7-205ENST00000439958 E7EVH7 732 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 M0QZQ0 153 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 DAB1O75553 588 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 FBXO21O94952 628 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 PTPN9P43378 593 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 GAD2Q05329 585 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 PDK2Q15119 407 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 RTP2Q5QGT7 225 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 CYP4V2Q6ZWL3 525 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-205ENST00000439958 ZBED8Q8IZ13 594 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 CDC42EP4Q9H3Q1 356 aaKnown RBP15.63■□□□□ 0.09
CPSF7-205ENST00000439958 PIH1D1Q9NWS0 290 aaKnown RBP15.63■□□□□ 0.09
CPSF7-205ENST00000439958 NEU2Q9Y3R4 380 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 EPHB2P29323 1055 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 AARSP49588 968 aaKnown RBP eCLIP15.63■□□□□ 0.09
CPSF7-205ENST00000439958 GSCP56915 257 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-205ENST00000439958 TPI1P60174 286 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 DSC1Q08554 894 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 LIMS2Q7Z4I7 341 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 DEPDC1BQ8WUY9 529 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 FAF2Q96CS3 445 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 CASD1Q96PB1 797 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 CSPG4P5Q96PW8 444 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 LGMNQ99538 433 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 LRRC4CQ9HCJ2 640 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 NOVA2Q9UNW9 492 aaKnown RBP15.63■□□□□ 0.09
CPSF7-205ENST00000439958 APRTP07741 180 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 L1CAMP32004 1257 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 PGFP49763 221 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 LONRF1Q17RB8 773 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 AUTS2Q8WXX7 1259 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 TMEM106CQ9BVX2 250 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 FAM107BQ9H098 131 aa15.63■□□□□ 0.09
CPSF7-205ENST00000439958 TDRD15B5MCY1 1934 aaKnown RBP15.62■□□□□ 0.09
CPSF7-205ENST00000439958 PDIA2Q13087 525 aaKnown RBP15.62■□□□□ 0.09
CPSF7-205ENST00000439958 ARL13BQ3SXY8 428 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 TAC4Q86UU9 113 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 EPS8L3Q8TE67 593 aaKnown RBP15.62■□□□□ 0.09
CPSF7-205ENST00000439958 ART4Q93070 314 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 CELF6Q96J87 481 aaKnown RBP15.62■□□□□ 0.09
CPSF7-205ENST00000439958 TPX2Q9ULW0 747 aaKnown RBP15.62■□□□□ 0.09
CPSF7-205ENST00000439958 PCDHB5Q9Y5E4 795 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 A0A1W2PQH9 124 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 FAM72CH0Y354 149 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 DPYSL4O14531 572 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 SCAMP3O14828 347 aaKnown RBP15.62■□□□□ 0.09
CPSF7-205ENST00000439958 TBX18O95935 607 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 GALTP07902 379 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 CAPN2P17655 700 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 YWHAGP61981 247 aaKnown RBP eCLIP15.62■□□□□ 0.09
CPSF7-205ENST00000439958 FAM189BP81408 668 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 BTG3Q14201 252 aaPredicted RBP15.62■□□□□ 0.09
CPSF7-205ENST00000439958 RALGAPA2Q2PPJ7 1873 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 TTMPQ5BVD1 217 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 FAM72AQ5TYM5 149 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 FAM72DQ6L9T8 149 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 FAM72BQ86X60 149 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 IQCKQ8N0W5 287 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 SELENOSQ9BQE4 189 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 ZBED2Q9BTP6 218 aa15.62■□□□□ 0.09
CPSF7-205ENST00000439958 POC1B-GALNT4F8VUJ3 575 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 GBP1P32455 592 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 RPL22P35268 128 aaKnown RBP15.61■□□□□ 0.09
CPSF7-205ENST00000439958 EFEMP1Q12805 493 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 SF3A3Q12874 501 aaKnown RBP eCLIP15.61■□□□□ 0.095e-6■■■□□ 15
CPSF7-205ENST00000439958 SLMAPQ14BN4 828 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 NFE2Q16621 373 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-205ENST00000439958 KCNT2Q6UVM3 1135 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 PQLC3Q8N755 202 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 PIK3R5Q8WYR1 880 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 YME1L1Q96TA2 773 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 PABPC3Q9H361 631 aaKnown RBP15.61■□□□□ 0.09
CPSF7-205ENST00000439958 WHRNQ9P202 907 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 H3BRJ5 948 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 KCNK1O00180 336 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 FYNP06241 537 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 CLTBP09497 229 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 IL4RP24394 825 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 OR1D2P34982 312 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 ZNF844Q08AG5 666 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 FASTKD3Q14CZ7 662 aaKnown RBP15.61■□□□□ 0.09
CPSF7-205ENST00000439958 OASLQ15646 514 aaKnown RBP15.61■□□□□ 0.09
CPSF7-205ENST00000439958 HEATR6Q6AI08 1181 aaKnown RBP15.61■□□□□ 0.09
CPSF7-205ENST00000439958 TAX1BP1Q86VP1 789 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 TP53INP2Q8IXH6 220 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 SLC35B2Q8TB61 432 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 KCTD13Q8WZ19 329 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 CDH23Q9H251 3354 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 DEFB103AP81534 67 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 LRRC26Q2I0M4 334 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 ANKRD22Q5VYY1 191 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 FAM171BQ6P995 826 aa15.61■□□□□ 0.09
CPSF7-205ENST00000439958 SYDE1Q6ZW31 735 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-205ENST00000439958 STRADAQ7RTN6 431 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms