RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 PCSK6P29122 969 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 SLC1A6P48664 564 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 TFAMQ00059 246 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 CCNIQ14094 377 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 NFIL3Q16649 462 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 SH3D19Q5HYK7 790 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 N4BP2L1Q5TBK1 243 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 LPCAT2Q7L5N7 544 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 TMC7Q7Z402 723 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 TTC13Q8NBP0 860 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 FAM156AQ8NDB6 213 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 MAELQ96JY0 434 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 CDRT15Q96T59 188 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 RBAKQ9NYW8 714 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 NDUFA13Q9P0J0 144 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 NYAP2Q9P242 653 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 SNCAIPQ9Y6H5 919 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 KLHL2O95198 593 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 TGDSO95455 350 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 SERPINA6P08185 405 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 ITGB5P18084 799 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 OSBPP22059 807 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 IL4RP24394 825 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 SOX11P35716 441 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 NLRP11P59045 1033 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 ART3Q13508 389 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 ITGA9Q13797 1035 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 TRMT10BQ6PF06 316 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 UNC5BQ8IZJ1 945 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 NETO2Q8NC67 525 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 SLC44A1Q8WWI5 657 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 MOCOSQ96EN8 888 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 DDX43Q9NXZ2 648 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 PTTG2Q9NZH5 202 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 TJP2Q9UDY2 1190 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 CNTNAP2Q9UHC6 1331 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 BUD23O43709 281 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 SIN3BO75182 1162 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 TRMUO75648 421 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 FAM58BPP0C7Q3 252 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 CDKN2BP42772 138 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 CD97P48960 835 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 NAA20P61599 178 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 ATP1A4Q13733 1029 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 FAM196AQ6ZSG2 479 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 AMIGO3Q86WK7 504 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 LDHDQ86WU2 507 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 RELL1Q8IUW5 271 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 PHTF2Q8N3S3 785 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 PIWIL2Q8TC59 973 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 CMTM5Q96DZ9 223 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 HAPLN3Q96S86 360 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 PAIP1Q9H074 479 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.07□□□□□ -0.484e-6■■□□□ 13.5
SMPD4-209ENST00000439886 NGRNQ9NPE2 291 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 KCND2Q9NZV8 630 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 AGO2Q9UKV8 859 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 ZNRF3Q9ULT6 936 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 GNEQ9Y223 722 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 RBMX2Q9Y388 322 aaKnown RBP12.07□□□□□ -0.48
SMPD4-209ENST00000439886 UTRNP46939 3433 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 CCDC78A2IDD5 438 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 STRNO43815 780 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 ITGAVP06756 1048 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 STT3AP46977 705 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 TSPY1Q01534 308 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 CES3Q6UWW8 571 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 ENOSF1Q7L5Y1 443 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 RNF169Q8NCN4 708 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 JOSD2Q8TAC2 188 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 DQX1Q8TE96 717 aaKnown RBP12.06□□□□□ -0.48
SMPD4-209ENST00000439886 ZNF516Q92618 1163 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 TMEM143Q96AN5 459 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 MXRA8Q9BRK3 442 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 MSTO1Q9BUK6 570 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 GPAMQ9HCL2 828 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 GABBR1Q9UBS5 961 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 ARHGAP26Q9UNA1 814 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 DRG1Q9Y295 367 aaKnown RBP12.06□□□□□ -0.48
SMPD4-209ENST00000439886 ARIH1Q9Y4X5 557 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-209ENST00000439886 TIMM22Q9Y584 194 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 CRTAMO95727 393 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 BDNFP23560 247 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 GCNT1Q02742 428 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 TCEAL1Q15170 157 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
SMPD4-209ENST00000439886 RNF111Q6ZNA4 994 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 FRMD7Q6ZUT3 714 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 ZNF276Q8N554 614 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 NAT8LQ8N9F0 302 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 AZIN2Q96A70 460 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 USP29Q9HBJ7 922 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 SEPT10Q9P0V9 454 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 NR2E3Q9Y5X4 410 aa12.06□□□□□ -0.48
SMPD4-209ENST00000439886 A0A1B0GTW7 788 aa12.05□□□□□ -0.48
SMPD4-209ENST00000439886 CALB1P05937 261 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms