RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 OVOS1Q6IE37 1185 aa12.22□□□□□ -0.45
SMAD3-202ENST00000439724 PPP1R21Q6ZMI0 780 aa12.22□□□□□ -0.45
SMAD3-202ENST00000439724 FAM43BQ6ZT52 329 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-202ENST00000439724 BHLHA9Q7RTU4 235 aa12.22□□□□□ -0.45
SMAD3-202ENST00000439724 THEM5Q8N1Q8 247 aa12.22□□□□□ -0.45
SMAD3-202ENST00000439724 URGCPQ8TCY9 931 aa12.22□□□□□ -0.45
SMAD3-202ENST00000439724 PGAP3Q96FM1 320 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-202ENST00000439724 QKIQ96PU8 341 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMAD3-202ENST00000439724 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
SMAD3-202ENST00000439724 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
SMAD3-202ENST00000439724 DMAP1Q9NPF5 467 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-202ENST00000439724 ZMYND8Q9ULU4 1186 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-202ENST00000439724 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
SMAD3-202ENST00000439724 SF3B1O75533 1304 aaKnown RBP eCLIP12.22□□□□□ -0.455e-6■■■■■ 142.6
SMAD3-202ENST00000439724 E7EVH7 732 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 COL6A1P12109 1028 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 TSHRP16473 764 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 RBL1P28749 1068 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 MAGEA6P43360 314 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 HNRNPH2P55795 449 aaKnown RBP12.21□□□□□ -0.45
SMAD3-202ENST00000439724 BASP1P80723 227 aaKnown RBP12.21□□□□□ -0.45
SMAD3-202ENST00000439724 TSPY1Q01534 308 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 GBE1Q04446 702 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 RNASELQ05823 741 aaKnown RBP12.21□□□□□ -0.45
SMAD3-202ENST00000439724 SCAPQ12770 1279 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 NOMO2Q5JPE7 1267 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 CLLU1OSQ5K130 101 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 PM20D1Q6GTS8 502 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 TDRPQ86YL5 185 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 ZBED8Q8IZ13 594 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 OR10T2Q8NGX3 314 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 BCAS4Q8TDM0 211 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 HASPINQ8TF76 798 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 OLFM3Q96PB7 478 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 FRMD8Q9BZ67 464 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-202ENST00000439724 KANSL3Q9P2N6 904 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 XPO7Q9UIA9 1087 aaKnown RBP12.21□□□□□ -0.45
SMAD3-202ENST00000439724 NAALADL1Q9UQQ1 740 aa12.21□□□□□ -0.45
SMAD3-202ENST00000439724 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.21□□□□□ -0.45
SMAD3-202ENST00000439724 TCRBV7S3A2A0A539 114 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 HACD1B0YJ81 288 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 KBTBD13C9JR72 458 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 GOLGA8MH3BSY2 632 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 CAPN9O14815 690 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 DGKIO75912 1065 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 ITGB1P05556 798 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 USP17L7P0C7H9 530 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 SELPP16109 830 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 GOT1P17174 413 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 AMPD1P23109 780 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 YY1P25490 414 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 CDK7P50613 346 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 NRLP54845 237 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 GAD2Q05329 585 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 SLC10A2Q12908 348 aaPredicted RBP12.21□□□□□ -0.46
SMAD3-202ENST00000439724 RASA2Q15283 850 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 EFHC2Q5JST6 749 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 FNBP1LQ5T0N5 605 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 BZW1Q7L1Q6 419 aaKnown RBP12.21□□□□□ -0.46
SMAD3-202ENST00000439724 LRRC8DQ7L1W4 858 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 BEND5Q7L4P6 421 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 EXOC3L1Q86VI1 746 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 CCDC13Q8IYE1 715 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 COLGALT2Q8IYK4 626 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 PDIK1LQ8N165 341 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 PYROXD2Q8N2H3 581 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 ATP11CQ8NB49 1132 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 SLC7A14Q8TBB6 771 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 RNF139Q8WU17 664 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 ARHGEF2Q92974 986 aaKnown RBP12.21□□□□□ -0.46
SMAD3-202ENST00000439724 SELENOSQ9BQE4 189 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 TRIM62Q9BVG3 475 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 RHOBTB2Q9BYZ6 727 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 MAGEB5Q9BZ81 275 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 ELAC1Q9H777 363 aaKnown RBP12.21□□□□□ -0.46
SMAD3-202ENST00000439724 WDR6Q9NNW5 1121 aaKnown RBP12.21□□□□□ -0.46
SMAD3-202ENST00000439724 ARHGEF4Q9NR80 690 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 PIGVQ9NUD9 493 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 TMLHEQ9NVH6 421 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 DTLQ9NZJ0 730 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 FETUBQ9UGM5 382 aa12.21□□□□□ -0.46
SMAD3-202ENST00000439724 EXOC1LA0A1B0GW35 172 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 TRAPPC3O43617 180 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 B4GALT3O60512 393 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 GCATO75600 419 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 DDHD2O94830 711 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 F9P00740 461 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 CHN1P15882 459 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 BDNFP23560 247 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 PHBP35232 272 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 ADRA1BP35368 520 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 VEGFBP49765 207 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 ZNF135P52742 658 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-202ENST00000439724 RABGGTBP53611 331 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 YWHAHQ04917 246 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-202ENST00000439724 NR1H3Q13133 447 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 SEMA3BQ13214 749 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 NME3Q13232 169 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 DPYSQ14117 519 aa12.2□□□□□ -0.46
SMAD3-202ENST00000439724 MSS51Q4VC12 460 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms