RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 USTQ9Y2C2 406 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 PLXNA3P51805 1871 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 I6L893 689 aaPredicted RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 MSI1O43347 362 aaKnown RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 ZNF500O60304 480 aaPredicted RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 SRGAP2BP0DMP2 458 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 MSNP26038 577 aaKnown RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 MIPP30301 263 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 ATP5C1P36542 298 aaKnown RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 CXCR3P49682 368 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 ETF1P62495 437 aaKnown RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 SLC25A11Q02978 314 aaKnown RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 DEUP1Q05D60 604 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 EFEMP1Q12805 493 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 NME3Q13232 169 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 TEAD2Q15562 447 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 CDO1Q16878 200 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 TXNRD3NBQ6F5E7 133 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 RSRC2Q7L4I2 434 aaKnown RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 SYCE1Q8N0S2 351 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 MICALL1Q8N3F8 863 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 ARL14EPQ8N8R7 260 aaPredicted RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 MRPS31Q92665 395 aaKnown RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 SLC39A13Q96H72 371 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 PEBP4Q96S96 227 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 KLF16Q9BXK1 252 aaPredicted RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 TLR10Q9BXR5 811 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 OLA1Q9NTK5 396 aaKnown RBP7.8□□□□□ -1.16
UBR3-205ENST00000439681 DDIT4Q9NX09 232 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 MARCH2Q9P0N8 246 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 DNMT3LQ9UJW3 386 aa7.8□□□□□ -1.16
UBR3-205ENST00000439681 SYNJ2BP-COX16A0A087WUM0 186 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 KCNU1A8MYU2 1149 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 ZNF197O14709 1029 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 DDX3YO15523 660 aaKnown RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 IRAK2O43187 625 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 RNF8O76064 485 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 F9P00740 461 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 CEBPBP17676 345 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 HDCP19113 662 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 RDXP35241 583 aaKnown RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 PEX5P50542 639 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 ZXDBP98169 803 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 ITIH3Q06033 890 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 ATP13A4Q4VNC1 1196 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 PEX26Q7Z412 305 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 TADA2BQ86TJ2 420 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 MIB1Q86YT6 1006 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 MAB21L3Q8N8X9 362 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 KRT35Q92764 455 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 HES6Q96HZ4 224 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 ZFRQ96KR1 1074 aaKnown RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 FCRL2Q96LA5 508 aaPredicted RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 C16orf45Q96MC5 204 aaPredicted RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 ZSWIM3Q96MP5 696 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 ALS2CR12Q96Q35 445 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 CDK5RAP1Q96SZ6 601 aaKnown RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 MAGEB5Q9BZ81 275 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 TASP1Q9H6P5 420 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 FAM204AQ9H8W3 233 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 TRPC7Q9HCX4 862 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 GKN1Q9NS71 199 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.79□□□□□ -1.16
UBR3-205ENST00000439681 COX16Q9P0S2 106 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 PCSK1NQ9UHG2 260 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 AMFRQ9UKV5 643 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 USP18Q9UMW8 372 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 PACSIN2Q9UNF0 486 aaPredicted RBP7.79□□□□□ -1.16
UBR3-205ENST00000439681 PCDHA3Q9Y5H8 950 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 SZT2Q5T011 3432 aa7.79□□□□□ -1.16
UBR3-205ENST00000439681 SLC12A8A0AV02 714 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 SOBPA7XYQ1 873 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 ENC1O14682 589 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 SPOPO43791 374 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 IGLV3-27P01718 113 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 PFKLP17858 780 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 DDX6P26196 483 aaKnown RBP eCLIP7.78□□□□□ -1.16
UBR3-205ENST00000439681 CTNNA2P26232 953 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 HOXD11P31277 338 aaPredicted RBP7.78□□□□□ -1.16
UBR3-205ENST00000439681 GBP1P32455 592 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 ADRA1BP35368 520 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 MARCKSL1P49006 195 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 SLC7A9P82251 487 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 NNTQ13423 1086 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 TRIP4Q15650 581 aaPredicted RBP7.78□□□□□ -1.16
UBR3-205ENST00000439681 CCDC85BQ15834 202 aaPredicted RBP7.78□□□□□ -1.16
UBR3-205ENST00000439681 ZC3H12AQ5D1E8 599 aaKnown RBP7.78□□□□□ -1.16
UBR3-205ENST00000439681 ATAT1Q5SQI0 421 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 ARTNQ5T4W7 220 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 GPR158Q5T848 1215 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 LRRC38Q5VT99 294 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 SCYL2Q6P3W7 929 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 SYT10Q6XYQ8 523 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 FAM131BQ86XD5 332 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 CCDC185Q8N715 623 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 ADAMTS19Q8TE59 1207 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 ALG3Q92685 438 aa7.78□□□□□ -1.16
UBR3-205ENST00000439681 WBP2Q969T9 261 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms