RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CDK18Q07002 472 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 MAP2K5Q13163 448 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 CCDC14Q49A88 953 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 LCLAT1Q6UWP7 414 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 MCUQ8NE86 351 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 LRRC39Q96DD0 335 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 NFKBIZQ9BYH8 718 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 PCDH18Q9HCL0 1135 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 SMYD2Q9NRG4 433 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 SIRPGQ9P1W8 387 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 BARX2Q9UMQ3 279 aaPredicted RBP16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 CAPN14A8MX76 684 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 KRT36O76013 467 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 PSMG1O95456 288 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 APOEP02649 317 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 PFKMP08237 780 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 MCF2P10911 925 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 MAGEA3P43357 314 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 BCAR1P56945 870 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 MRPS35P82673 323 aaKnown RBP16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 OCRLQ01968 901 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 BST1Q10588 318 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 CDO1Q16878 200 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 HSF5Q4G112 596 aaPredicted RBP16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 TEX44Q53QW1 395 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 BOLA3Q53S33 107 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 FAM182AQ5T1J6 154 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 LGSNQ5TDP6 509 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 FAXCQ5TGI0 409 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 ALYREFQ86V81 257 aaKnown RBP16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 MECRQ9BV79 373 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 ABHD16BQ9H3Z7 469 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 PRMT7Q9NVM4 692 aaPredicted RBP16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 GPATCH2LQ9NWQ4 482 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 PIK3R2O00459 728 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 NDST1P52848 882 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 TNFAIP2Q03169 654 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 LAMC2Q13753 1193 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 CCDC6Q16204 474 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 MUM1Q2TAK8 710 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 CES4AQ5XG92 561 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 ATG16L1Q676U5 607 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 EFCAB12Q6NXP0 572 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 UNC5AQ6ZN44 842 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 PCDH19Q8TAB3 1148 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 RAB3IL1Q8TBN0 382 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 WDR60Q8WVS4 1066 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 E2F7Q96AV8 911 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 MTBPQ96DY7 904 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 HPDLQ96IR7 371 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 TBCBQ99426 244 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 FAM124BQ9H5Z6 455 aaPredicted RBP16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 ASB7Q9H672 318 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 TSPAN16Q9UKR8 245 aa16.98■□□□□ 0.31
CLCNKA-203ENST00000439316 GRAP2O75791 330 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 LINGO3P0C6S8 592 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 CSH1P0DML2 217 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 CSH2P0DML3 217 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 SLC26A2P50443 739 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 RAP1GDS1P52306 607 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 FAM187BQ17R55 369 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 ZNF534Q76KX8 674 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 DPH6Q7L8W6 267 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 ARHGAP24Q8N264 748 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 ARMC2Q8NEN0 867 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 NRG4Q8WWG1 115 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 FAM136AQ96C01 138 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 ZBTB10Q96DT7 871 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 ZNF670Q9BS34 389 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 FLRT1Q9NZU1 646 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 ARMCX1Q9P291 453 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 KIAA1257Q9ULG3 409 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 HEY1Q9Y5J3 304 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 FAM159BA6NKW6 160 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 ZNF487B1APH4 448 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 UGT1A9O60656 530 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 KRT38O76015 456 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 STAU1O95793 577 aaKnown RBP16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 APRTP07741 180 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 PSEN1P49768 467 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 TMPRSS15P98073 1019 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 SLC34A1Q06495 639 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 BMPR2Q13873 1038 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 AMHR2Q16671 573 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 PRAMEF19Q5SWL8 479 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 SNX30Q5VWJ9 437 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 OLFML1Q6UWY5 402 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 C4orf22Q6V702 233 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 TREML1Q86YW5 311 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 SNRNP25Q9BV90 132 aaKnown RBP16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 WWP1Q9H0M0 922 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 SMARCAD1Q9H4L7 1026 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 PDZD7Q9H5P4 517 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 UGT1A7Q9HAW7 530 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 UGT1A10Q9HAW8 530 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 UGT1A8Q9HAW9 530 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms