RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 BBS2Q9BXC9 721 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 CYLDQ9NQC7 956 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 TRPM5Q9NZQ8 1165 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 DSEQ9UL01 958 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 SH3BP1Q9Y3L3 701 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 PCDHB11Q9Y5F2 797 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 NPC1O15118 1278 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 TCEA3O75764 348 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 SLITRK3O94933 977 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 ABL1P00519 1130 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 CXCL8P10145 99 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 MCF2P10911 925 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 HGFP14210 728 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 SMTNL2Q2TAL5 461 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 SLC45A4Q5BKX6 768 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 SCN4BQ8IWT1 228 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 FBXO39Q8N4B4 442 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 MCPH1Q8NEM0 835 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 LEO1Q8WVC0 666 aaPredicted RBP11.83□□□□□ -0.52
RTN4-211ENST00000438462 ACO2Q99798 780 aaKnown RBP11.83□□□□□ -0.52
RTN4-211ENST00000438462 LRRC2Q9BYS8 371 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 PPM1HQ9ULR3 514 aa11.83□□□□□ -0.52
RTN4-211ENST00000438462 UBQLN1Q9UMX0 589 aaKnown RBP11.83□□□□□ -0.52
RTN4-211ENST00000438462 A0A087WWV3 80 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 ZNF840PA6NDX5 716 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 EFCAB7A8K855 629 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 CASC3O15234 703 aaKnown RBP11.82□□□□□ -0.52
RTN4-211ENST00000438462 CISD3P0C7P0 127 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 GIMD1P0DJR0 217 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 ACO1P21399 889 aaKnown RBP11.82□□□□□ -0.52
RTN4-211ENST00000438462 DGKAP23743 735 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 NLRP5P59047 1200 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 USP46P62068 366 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 TSPY1Q01534 308 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 ZNF234Q14588 700 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 NFE2Q16621 373 aaPredicted RBP11.82□□□□□ -0.52
RTN4-211ENST00000438462 TP53INP2Q8IXH6 220 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 SPATA3Q8NHX4 192 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 SERAC1Q96JX3 654 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 C5orf34Q96MH7 638 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 ABCB6Q9NP58 842 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 KCNMB3Q9NPA1 279 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 EVA1BQ9NVM1 165 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 SCN1AP35498 2009 aa11.82□□□□□ -0.52
RTN4-211ENST00000438462 MN1Q10571 1320 aaPredicted RBP11.82□□□□□ -0.52
RTN4-211ENST00000438462 PRAMEF33A0A0G2JMD5 474 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 K7EM74 188 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 ABLIM1O14639 778 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 PRAMEF10O60809 474 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 LYPLA2O95372 231 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 CYP3A5P20815 502 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 MCM5P33992 734 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 ADRA1BP35368 520 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 EFNA5P52803 228 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 MYL7Q01449 175 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 CCDC142Q17RM4 750 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 WSCD1Q658N2 575 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 GUSBP11Q6P575 273 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 NCEH1Q6PIU2 408 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 APOA5Q6Q788 366 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 MOXD1Q6UVY6 613 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 TPGS1Q6ZTW0 290 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 TAOK1Q7L7X3 1001 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 RAB11FIP2Q7L804 512 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 TMPRSS9Q7Z410 1059 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 GDF7Q7Z4P5 450 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 DTX1Q86Y01 620 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 JPH3Q8WXH2 748 aaPredicted RBP11.81□□□□□ -0.52
RTN4-211ENST00000438462 BHMTQ93088 406 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 WBP2Q969T9 261 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 CATSPER2Q96P56 530 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 TCHPQ9BT92 498 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 USP29Q9HBJ7 922 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 EPB41L5Q9HCM4 733 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 PISDQ9UG56 409 aa11.81□□□□□ -0.52
RTN4-211ENST00000438462 TACC2O95359 2948 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 TCP11X1B4DZS4 312 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 CYB561D2O14569 222 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 NVLO15381 856 aaKnown RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 DNTTP04053 509 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 ALPPL2P10696 532 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 SSRP1Q08945 709 aaKnown RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 ZNF177Q13360 481 aaPredicted RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 KCNJ12Q14500 433 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 ZBTB6Q15916 424 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 CDKN3Q16667 212 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 GEN1Q17RS7 908 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 TTC31Q49AM3 519 aaPredicted RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 MPZL3Q6UWV2 235 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 SERPINA13PQ6UXR4 307 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 SYNE3Q6ZMZ3 975 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 EFL1Q7Z2Z2 1120 aaKnown RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 EIF2AK1Q9BQI3 630 aaKnown RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 PYM1Q9BRP8 204 aaKnown RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 TARS2Q9BW92 718 aaKnown RBP11.8□□□□□ -0.52
RTN4-211ENST00000438462 RUBCNLQ9H714 662 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 SYNDIG1Q9H7V2 258 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 CAAP1Q9H8G2 361 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms